Daucus carota (carrot): 108223666
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Entry
108223666 CDS
T05350
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
108223666
04980 Cobalamin transport and metabolism
108223666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108223666
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108223666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
TMEM237
AcrZ
Motif
Other DBs
NCBI-GeneID:
108223666
NCBI-ProteinID:
XP_017253522
UniProt:
A0A162A512
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Position
5:37666486..37674113
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AA seq
510 aa
AA seq
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MGDFNLALVLVAIIVSILVFIFNIYLLINYQHPDDKNQAYFPKFVVVFGLTVAFLSILML
PADVANRQACKHAIYNGACNFTLPMKDLWLAIYIVDAILVFFVIPFAMFYYEGDQDKTIG
KRMKSALCWVVTTAIVVALVLGILYGLVGKVDFTVKHLTSDTTTFTNNWSSFTSGQQCIG
NGARQCSAFTSNSSSETTWTQRATFPEYVVALATIVGSVLFSIFGGVGIACLPLGLIFSF
IRRPKAVITRSQYIKEATELGKKAKELKKAADALHQEERSGSKGRKWRKNTKALEKELLL
LEEDVKALEEMYPQGEKAETTWALTVLGYLAKLVLGILGLIVSIAWIAHIVIYLLIDPPL
SSFLNEVFIKLDDIWGLLGTAAFAFFCMYLLFAVIAGAMMLGLRLVFITIHPMKWGATLM
NSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIA
FIVLAGLTFVYYAAFGWRRKKPSGRFQLSS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttcaacctcgcactagtcctagtagccataatcgtctcaatcctagtcttt
atcttcaacatctaccttctaataaactaccaacaccctgatgataagaaccaagcttat
ttccccaaatttgtagttgttttcggtctcactgtcgccttcttgtcgattcttatgtta
ccggccgatgtcgcgaatcggcaagcttgtaaacacgctatttacaatggcgcttgtaat
ttcacgctcccgatgaaggatttgtggcttgcgatttacattgttgatgctattctcgtg
ttcttcgttattccgtttgcgatgttctattatgaaggcgatcaggacaagactattggt
aagaggatgaaaagtgcgttgtgctgggtggttactactgctattgttgttgcgcttgtg
ctcgggattttgtacggtcttgttggaaaagtggactttactgttaaacacctcacttct
gatacaactacctttacaaataattggtcaagtttcacaagtggccaacagtgtattgga
aatggtgcacgtcagtgttctgcatttacttcaaattcttcgtcagagacaacttggaca
cagcgtgccacttttccggaatatgtcgtagctttggccacaattgttggctctgtactt
ttctcaatatttggcggtgttggaattgcttgtttaccactgggacttatattttccttc
attagacgtccgaaggctgttataactcgttcacagtatatcaaggaagcaacagaacta
ggtaaaaaggcaaaggaattgaagaaagctgctgatgccttgcatcaggaagaaagaagt
ggatccaaaggaagaaagtggcgtaagaacaccaaggcactcgaaaaggagttgcttctt
ttggaagaagatgtcaaagcattagaagaaatgtatccccaaggtgaaaaggctgagacg
acgtgggctttgaccgttcttggttatttggccaaacttgttttggggattttggggtta
atagtgtcaattgcatggattgcacatatcgtgatatatctattgattgatcctccactt
tcttcattcttgaatgaagttttcatcaagttagatgatatctggggtctgctgggtact
gctgcatttgctttcttttgcatgtatctcctctttgcagtgattgctggggcaatgatg
cttggtctgagattggtttttatcactattcatcctatgaagtggggagcaactctcatg
aattcctttctgttcaatgtggggcttattcttctttgttctataagtgttattcagttc
tgttctactgcatttgcctactatgcccaagctactgctgctcaagaaatatttggtcac
acattgcaatctctccgtggaatcaaatatttatacaagtataacgtgttccaaattgca
tttattgttctggccggtttaacgtttgtgtattatgcagcctttggatggagaaggaaa
aaaccaagtggcaggttccaactttccagttga
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