Daucus carota (carrot): 108223673
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Entry
108223673 CDS
T05350
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108223673
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
108223673
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108223673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
108223673
NCBI-ProteinID:
XP_017253533
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All DBs
Position
5:11071651..11079843
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AA seq
628 aa
AA seq
DB search
MAAKGAMKKKATSNSNKTNSRKKQKKEIELPNPKIQEKVVDDDISGSDVDSDVDDDMLVE
QHRDDSDDSASDALSDGDQPFTDDFLQDDNVDGEKSSDSDSDSDHSDIERKSKAIDAKKE
KEEKEAEAELVDNIKEQADEVTLPTPQELKEEAQGPPDLPRLQRRIKEVVRVLSNFKTLR
QEGASRKDYVKQLTMDLASYYGYNDYLIEVLVEMFPAVELVELIEAFEKPRPMCLRTNTL
KARRRDLAGILLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPV
MALAPQEKERIVDMAAAPGGKTTYVAALMKNSGVIFANEIKEKRLKSLTANLSRMGVTNT
VVCNYDGRELPKVLGQNSADRVLLDAPCSGTGVISKDESVKTSKSLEDIQSCCHLQKELI
LAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFGRPGFINYR
EQRFHPSLEKTRRFYPHVHNMDGFFVAKFKKMSNSKAAPAPTTEQPEGGDEVIEPIDSVI
KKKAEDKVVHHRIHESSTKEKVHRENGIAQHGKAENTFSGKKRKERKRFSREEISKSREE
KRAALRTAAKGKPFSKEKKFAKEARTTK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaagggggcaatgaaaaagaaagctactagtaatagtaataaaactaattct
agaaagaagcagaagaaggaaattgagctcccaaaccctaaaattcaggagaaagttgtt
gatgatgatattagtggtagcgatgtcgatagcgatgtcgatgatgatatgttagttgag
cagcatcgtgatgacagtgatgattctgcttccgatgctttgtctgatggtgaccaacct
tttacggatgattttcttcaggatgataatgtcgatggagagaagagttcggattctgat
tcagactcggatcactctgatatcgagagaaaatctaaagctatcgatgctaagaaggaa
aaagaagagaaagaagcagaagctgaacttgtggataatattaaggaacaagctgatgaa
gtcacattaccaaccccgcaggaacttaaagaagaggcgcagggacctcctgatcttcca
aggctccagcgcaggattaaagaagtcgttcgggtgctttcgaatttcaagacgctacgt
caagaaggggcatcaaggaaggattatgttaagcagcttacaatggatttggcttcatac
tatggttacaatgattacctgattgaggtcttagtggagatgtttcctgcagttgaactt
gtagagcttatcgaggcttttgagaaacctcggcctatgtgtcttcgaactaacacttta
aaggcacgcagaagagacttggctggcattttgttgaacaggggtgtaaatttagatccc
ttaagcaagtggtcaaaagttggcttagttgtttacgactctcaagtacccattggtgcc
actcctgaatacatggctggtttctatatgttacaaagcgctagctcttttctaccggtt
atggcccttgctcctcaggaaaaggaaagaatcgtggatatggcagctgctcctggtggt
aaaacaacgtatgttgctgcacttatgaaaaacagtggtgtaatttttgccaatgagata
aaggagaaaagactcaagtcactaacagcaaatttatctcgcatgggagtaacaaacact
gttgtttgcaactatgatgggagggagctacccaaagttttgggccaaaactcagctgac
agggtattgctggatgctccttgcagcggtactggagttatatcgaaagatgaatctgtc
aaaacctccaaaagtcttgaagatatacagagttgttgtcatctgcagaaggagttgatc
cttgcagcaatagatatggttgatgcgaattcaaaatcagggggctacatagtttactcc
acttgctccataatggttgctgagaatgaagctgtaatagactatgcacttaaaaagagg
gatgtgaaacttgtcccgtgtggacttgactttgggcgtccaggatttattaattacagg
gagcagcgattccacccatcattagaaaagacaaggagattttatccacatgttcacaac
atggatggattttttgttgcaaagttcaaaaaaatgagcaattcgaaggctgcccctgct
ccaactaccgaacagccagaaggtggggatgaagtgatcgagcccatagatagtgtgata
aaaaagaaggccgaggacaaagtagtgcaccatagaatacatgaaagctctacaaaagaa
aaggttcaccgcgagaatggcattgctcagcatggaaaggctgaaaatacattctctggc
aaaaagagaaaagagaggaaacgcttttctagagaggagatatcaaaatcaagagaagag
aaaagagctgctttgaggacagcggcaaagggaaagcctttttccaaagagaaaaaattt
gcgaaagaggctcgaactaccaagtga
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