Daucus carota (carrot): 108223721
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Entry
108223721 CDS
T05350
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108223721
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108223721
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108223721
03036 Chromosome and associated proteins [BR:
dcr03036
]
108223721
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108223721
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108223721
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108223721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
rRNA_methylase
Motif
Other DBs
NCBI-GeneID:
108223721
NCBI-ProteinID:
XP_017253596
UniProt:
A0A164ZES2
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All DBs
Position
5:41315741..41319846
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AA seq
485 aa
AA seq
DB search
MFNKIIKRGQKKGSKQEVIEPPNTNPDATPSVTVNHASRASTGSPSVTQQITVPNSGVVE
VLPGLKDVPVADRHVLFIKKLQLCCVGFDFSEAMKNAREKEIKRQTLSELVDLVQSGSWK
MNEIIQEEMIKMISVNLFRCLPPSSHENTGSTGGDGDEDDMYLEPSWPHLQIVYELLLRY
VVSSDTDTKVAKRYLDHSFVLKLLDLFDSEDPREREYLKTVLHRVYGKFMVHRPCIRKAI
NNIFYRFIFETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALIPLHKPKSVSTYH
QQLSYCIIQFVEKDFKLSDTVIRGILRYWPVTNCGKEVLFLGELEEVLDVTQSSEFQRCM
VPLFRQISRCLNSPHFQVAERALFLWNNDHIVRLMSEYRQVVLPVIFEALEKNVRSHWNQ
AIHGLTTNVQRMFHEMDPELFEECQKEYYEKESRAAELEEKRKLTWQRLEMVAAKGGGDD
MVMVN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaagataattaaacgggggcaaaagaagggttcgaagcaagaagttattgaa
ccgccgaatactaatccagatgctacaccatcagttactgtgaaccatgcgtctcgagct
tccactgggtcgccatctgtcacacagcaaataactgtgcccaactcgggtgtggttgag
gttttacctgggttgaaagatgtcccggtagcagatcgtcatgttttgtttattaagaag
ctgcagctttgttgtgtgggttttgatttctcggaagcgatgaagaatgcgcgtgaaaag
gagattaagaggcaaacactgtcagagcttgttgatttggtgcaatctggttcatggaag
atgaatgagattatacaggaggagatgattaagatgatctcggttaatcttttccggtgt
ttgcccccatcgtctcatgagaatacaggcagtacaggtggagacggagatgaagatgac
atgtacttggagccatcttggcctcacttgcagatagtgtatgagttacttctgagatat
gtggtttcatcagatacagatactaaggttgcaaagcgatatttggatcattcatttgtg
ttgaagttacttgatttatttgattcagaggatccaagagagcgggagtacctaaaaacg
gtccttcatcgtgtttatggaaagttcatggttcatcgcccttgtataaggaaagcaata
aataatatcttttatcgatttatatttgaaacagagaggcacagcgggattggtgagttg
ttggagattcttggtagcataataaatggttttgcgcttccaatgaaagaagaacataag
ttgttccttgtccgagctcttattcctctccacaagcctaaatcggtctctacatatcat
caacagctgtcttattgcatcatccagtttgttgagaaagatttcaagttgtctgatact
gttatccgtgggatattgagatactggccagtcactaattgtgggaaagaggttcttttc
ctcggggaactggaagaagtcttggacgtaacacagtcttctgagtttcagcgctgtatg
gttcctctttttagacagatttcacgctgcctcaatagcccacattttcaggtcgctgaa
cgggcactcttcttgtggaacaatgatcacattgtgagattaatgtcagagtaccggcaa
gttgtcttgccagttatctttgaggcattagagaagaatgttcgtagtcactggaaccag
gcaatccatgggctgactacaaatgttcaaagaatgttccacgagatggatcctgagcta
tttgaagaatgccagaaggagtattatgagaaggaatcaagagcggcagaattggaggag
aagcggaagttgacatggcagagactggaaatggttgctgcaaagggcgggggagatgac
atggtaatggtcaactga
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