Daucus carota (carrot): 108223730
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Entry
108223730 CDS
T05350
Name
(RefSeq) histone acetyltransferase GCN5 isoform X2
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108223730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108223730
03036 Chromosome and associated proteins [BR:
dcr03036
]
108223730
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108223730
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108223730
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108223730
HAT complexes
PCAF complex
108223730
STAGA complex
108223730
TFTC complex
108223730
SAGA complex
108223730
SLIK complex
108223730
ADA-HAT complex
108223730
HAT-A2 complex
108223730
ATAC complex
108223730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
108223730
NCBI-ProteinID:
XP_017253609
UniProt:
A0A164Z205
LinkDB
All DBs
Position
5:35424638..35432815
Genome browser
AA seq
532 aa
AA seq
DB search
MDNHLTAPVRSRSTQSPSPSHSASASATSSIRKRKRASENHAPPFPSSFSDTRDGALTSN
DESISARGNDSDSSDESEEVVDEDEEEYDDSMRTFTVNRLENSVGPSARTTKLKTENSVK
VEPNLAGNSVTGDPVVGQSAARLGGKEDTAKSIFTENIQTGGAYSAREENLKREEEAGRL
KFSCVRNDGIDEHMVWLIGLKNIFSRQLPNMPKEYIVRLVMDRTHKSVMLVRSNTVVGGI
TYRPYLSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDADGLTHFLTYADNNAVGYF
KKQGFTKEIYLEQERWRGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIREL
SNCHIVYPGIDFQKKEAGVPKRVIKVEDIPGLKEAGWSPDQYGHSRFKLLSASADNTSNQ
KQLTALMRALLKAIYDHPDAWPFKEPVDSRDVPDYYDIIKDPMDLKTMSKRVESEQYYMT
LEMFVADAKRMFANARTYNSPETIYYKCSSRLEAHFTSKVQLGLQSGLKIQH
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcacctaacggcgcctgtacgttcgcggagcacgcaatctccgtcgccgtca
cactccgcctcggcctccgccacctcatcaatccgcaaacgaaagcgcgcgtctgagaac
cacgcgccgcccttcccgtcctcgttttccgacactcgtgacggcgcgctgacctccaac
gacgaaagcatcagcgcccgcggcaatgattctgactcgtccgacgagtcagaagaggtc
gtggacgaagacgaagaagagtatgatgattcgatgcgcacgtttacggttaatcggttg
gagaatagtgtgggaccgtcagcacggactacgaagctcaaaactgaaaattcagttaaa
gttgaaccgaatttggcgggaaactctgttacaggggatccagtggttggacagagcgcg
gcgaggttaggaggtaaggaggatacggctaagagtatatttacggagaatatacagact
ggaggtgcttatagtgctcgagaagagaatttgaaaagagaagaggaagcagggcgactc
aaattttcatgtgtaagaaatgatggtattgatgagcatatggtttggttaataggattg
aagaatatattttctaggcaactgcctaatatgccaaaggagtacattgtgcgtcttgtg
atggacagaactcataagtctgtaatgcttgtcagaagtaacacagttgttggtgggata
acataccgaccatatttaagccagaagtttggcgagatagctttttgtgcaataacagca
gatgaacaagtaaaaggttatggcactagattgatgaaccatttaaagcaacatgcacgt
gatgctgatggtctgactcattttctgacttatgctgataataacgctgttggatatttt
aagaaacagggcttcaccaaagaaatatacttggagcaagagcggtggcgtgggtatatt
aaagattatgatggagggatacttatggagtgcaaaatcgatcccaagctgccgtacact
gatttgtcaactatgatcagacgtcagaggcaggcaattgatgaaaagatacgagaacta
tcaaattgtcatatagtctaccctggaattgatttccaaaagaaagaagctggtgtacct
aaaagagtcattaaagttgaggacattcctggtttaaaggaggctggatggagtcctgat
cagtatggtcattcacgatttaaattattaagtgcctctgcagacaacacatctaatcaa
aagcaattgactgccctcatgcgtgcacttctgaaggctatatatgaccatcccgatgct
tggccatttaaggaaccagtcgattcacgtgatgtgcctgattattacgatataataaaa
gatcccatggacctgaagacgatgtcaaagcgagttgaatcagagcaatactatatgacg
ctcgaaatgttcgttgcagatgccaaaaggatgtttgcaaatgcgcgcacatataactct
cctgaaaccatctactataaatgttcatctaggttggaagcacatttcacgtcaaaggtt
cagttaggtcttcagtcgggtctcaaaatccaacattag
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