KEGG   Daucus carota (carrot): 108223778
Entry
108223778         CDS       T05350                                 
Name
(RefSeq) DNA mismatch repair protein MLH1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03430  Mismatch repair
dcr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    108223778
   03460 Fanconi anemia pathway
    108223778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108223778
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     108223778
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 108223778
NCBI-ProteinID: XP_017253686
LinkDB
Position
5:17667393..17690235
AA seq 740 aa
MALETTSTLMEIDEEENASVIVKEPPKIHRLDESVVNRIAAGEVIQRPVSAIKELVENSL
DAGSTSINIVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTFEDLHSIKSMGFR
GEALASMTYVSHVTVTTITPGQLHGYRASYRDGMMEYEPKACAAVKGTQIMIENLFYNMT
ARKKTLQNSGDDYPKIVDLLSRFAIHHINVSFSCRKHGAPRADVHSVASSSKIDAIRSVY
GVSVAQNLMAVEASDDDASSSVFEMHGLISDSNYIAKKITMVLFINDRLVECAALKRAVE
IVYSATLPKASKPFIYMSLVLPSEHVDVNVHPTKREVSLLNQEVIIEKIQAVVESKLRNS
NEGRTFQEQTVDPMPSSPMTASQASPSAPSTSASGFKMPKVPHKIVRTDSQDPAGRLHAY
MHIKSPVHVERNSALASVRSLVRRRRNPRETADLTSVQELLDDINRSCDSGLLDVVKHCT
FIGMADDIFALVQHKTHLYLANVVNLSKELMYQQVLRRFAHCNAIQLSEPAPLLELILLA
LKEDDIDADGDGNDDLKNKIAEMNTDLLRRKSDMLDDFFSIHVDEEGNLGRLPVILDQYT
PEMDRLPEFVLCLGNDVDWDDEKTCIQSVAAAIGNFYAMHPPLLPNPAGEGLQFYKRKPS
CKSEERDATTLGDSGEIKDDIEHELLSEAENAWAQREWTIQHILFPSMRLFFNPPCSMAR
NGTFVQVASLEKLFKIFERC
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggcgcttgaaacgacatcaaccctaatggaaatagacgaagaagaaaatgcatcggta
attgtgaaagaaccgccgaagatccaccgcttagatgagtcggtcgtcaatcgaatcgcc
gccggcgaagtcattcagcgccctgtttccgccatcaaagagctcgtggagaacagtctg
gatgctggttctacttccataaacatcgtcgttaaggacggcggtcttaaacttattcaa
gtctccgatgacggtcacggtattcgatatgaggacttgccgattctgtgcgagaggcac
acgacgtcgaagctttctacatttgaagatttacattcaattaagtctatgggtttcaga
ggagaggctttggctagcatgacctatgtaagtcatgtgacagtcaccaccattacccct
ggtcaattgcatggctacagggcatcttatagagatggcatgatggagtacgaacccaaa
gcttgtgctgcagtaaaggggactcagataatgattgagaatttgttttacaacatgact
gctcgaaagaaaacacttcagaattctggtgatgattatcctaaaattgtagatctgcta
agtcggtttgccattcatcacataaatgtgagcttttcatgcagaaagcatggcgcacct
agagcagatgttcactcagtagcttcatcctcaaagattgatgcgattagatctgtttat
ggggtgtcagttgcgcagaatctaatggcagtagaagcttctgatgatgatgcatctagt
tccgtttttgaaatgcatggtctaatttcagattcgaattacatcgcaaagaagataact
atggtacttttcatcaatgatagattagttgagtgtgctgctctgaagagggctgttgaa
attgtttattctgcaactttgcctaaagcatcgaaacctttcatatatatgtcacttgtg
ttgccttcagagcatgttgatgtgaacgttcatccaacaaagagagaggtgagccttttg
aaccaagaagttattattgaaaagatacaagcagtggtggaatcaaaattgagaaactcc
aatgagggaaggacattccaagaacagacagtagacccaatgccatccagtcctatgaca
gcaagccaagcttcacctagtgctccctcaacttcagcctcaggcttcaaaatgccaaaa
gttccacataagattgtgcggacagattcacaggatcctgctggaaggctgcatgcctac
atgcatatcaaatcccctgtccatgttgaaaggaatagtgctttagcctctgtaaggtct
ttggtcaggcgaagaagaaatccaagggaaaccgctgatcttactagcgtccaagagctc
cttgatgatatcaaccgttcctgcgattctggtctgttggacgtcgtaaagcactgcaca
tttattggaatggcagatgatatatttgctttggttcagcataagactcacctatatctt
gctaatgttgtgaacttgagcaaagagctcatgtatcaacaagtcttgcgtcgttttgca
cattgtaatgccatacaactaagtgaaccagctcctctgctggaattgattttactagca
ctaaaggaggacgacatagatgctgatggtgatggaaatgatgatttgaagaataaaatt
gctgaaatgaacacagatttgctgagacggaagtcagatatgctagatgattttttctct
attcatgttgatgaagagggtaatttggggagactccctgttatacttgatcagtacaca
cctgaaatggaccgtctcccagaatttgtattatgtttgggcaacgatgttgattgggat
gatgagaaaacctgcattcaatcagttgcagctgctataggaaacttctatgccatgcat
cctcctcttttgcccaacccagccggtgaaggtttacaattctacaagaggaaaccatct
tgcaaatctgaagaacgagatgcaacaactttaggtgatagtggtgagataaaggatgat
attgagcatgaactgctttcagaggctgagaatgcttgggcgcagcgcgaatggacaata
caacacatcttattcccttccatgagacttttctttaatcccccatgttcaatggccaga
aatgggacatttgtccaggtggcttcgttggagaaactattcaagatattcgagcgatgc
tga

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