KEGG   Daucus carota (carrot): 108223792
Entry
108223792         CDS       T05350                                 
Name
(RefSeq) ubiquitin receptor RAD23d
  KO
K10839  UV excision repair protein RAD23
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03420  Nucleotide excision repair
dcr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108223792
  09124 Replication and repair
   03420 Nucleotide excision repair
    108223792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:dcr03051]
    108223792
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108223792
Proteasome [BR:dcr03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    108223792
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      108223792
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin Rad60-SLD UBA_7 CUE Dsc3_N TECR_N UBA_RAD5A UBA_3 Ubiquitin_4 Rad60-SLD_2 Ubiquitin_5
Other DBs
NCBI-GeneID: 108223792
NCBI-ProteinID: XP_017253702
LinkDB
Position
5:12679055..12685885
AA seq 384 aa
MKVFVKTLKGTNFEIQVQPDNTISEVKNIIETKQGANVYPALQQILIHQGKVLKDTTTLE
ENNVAENSFIVVMLSKAKNPSGEASTTSAAPASTAQAVNPSPSPVQPVTSSQAPASTVQI
PQPGSESTPISAPDTSVADVYGHAASNLVAGGNLESTIQQILDMGGGSWDRDTVVRALRA
AFNNPERAVEYLYSGIPEQVLAPVAAQEPTGGQAINPPSQAPQATVPPGGPNADPLNLFP
QGLPNMGANANAGNLDFLRTNPQFQALRGMVQANPQILQPMLQELGKQNPNLMRLIQEHQ
ADFLRLINEGDEGGEGNVLGDLGGAAPQAIAVTPEEREAIERLEAMGFDRAVVLQVFFAC
NRDEELAANYLLDHGHEFDDDVAN
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgaaagtgtttgtgaaaactttgaaaggcactaactttgagatccaagtccaacctgat
aatactatatccgaggtgaagaatatcatagagacaaaacagggtgcaaatgtttaccct
gctctacagcagatacttatccatcagggaaaggtacttaaggatacaaccacgctagag
gagaacaatgttgctgagaatagttttattgttgttatgctatcgaaggctaaaaatcca
tcaggtgaggcatcaactacatcagctgcacctgcaagcacggctcaggcagtcaaccct
tcaccttctccagtacagcctgtaacatcatctcaagcacctgcatctactgttcagatc
ccacaaccgggatccgaatctactccgatttctgctcctgatacatctgtggcagatgta
tacggtcatgctgcatcaaatcttgtggctggaggtaacctagaatctacaatacagcaa
attcttgatatgggtggagggagctgggatcgtgatacagttgttcgtgcactgcgtgcc
gcgtttaacaatcctgagagagctgttgaatacctatattcaggaattcccgagcaagtt
ttagctcccgttgcagcccaagaacctactggaggtcaagctataaaccctccgtcgcag
gcaccacaagcaacagtaccccctggtggccctaatgcggaccctctgaatcttttccca
cagggacttccaaatatgggcgcaaacgcaaatgcggggaacttggactttctacgcacc
aatccgcagtttcaagccttgcgaggaatggttcaagcaaatcctcaaatactgcagcct
atgcttcaggaattgggaaagcaaaatccgaacctgatgcgacttattcaggagcatcag
gcggactttctgcgtttgataaatgaaggtgatgaagggggggaagggaacgtactgggg
gatctgggtggagctgctccgcaagctatagctgttacacctgaagagcgagaggcaatt
gaacgtcttgaagcaatgggtttcgatcgagctgtagtattgcaagtattcttcgcatgt
aacagagatgaggaactggctgctaactatcttttggatcatggtcatgagtttgatgat
gacgtagctaactga

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