Daucus carota (carrot): 108223837
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Entry
108223837 CDS
T05350
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25869
zinc finger protein IDD1/2
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108223837
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108223837
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-BED
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108223837
NCBI-ProteinID:
XP_017253763
UniProt:
A0A164Y592
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All DBs
Position
5:complement(13415465..13418535)
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AA seq
511 aa
AA seq
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MPEIIDSSAAVNDTTASGDASVLSSGDQMPPPKAEKKKRNLPGMPDPDAEVIALSPKTLM
ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIRKRVYVCPEESCIHHDPSR
ALGDLTGIKKHYFRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRD
SFITHRAFCDALAVESAKEPVAPPSVEEEPEPQTVDASPPSPLPPQQPSSPPSVPTSSAA
TSMGLPDQTAAIDSAQLQENPVSKSTQILDDTPTVVQVASLTGSCSSISSSSSNGSTRST
VFASLFASSTASGSMQSQATGFTDFIHATAQADPMHDMGPSLSIEPTSLSLATNHGSSIF
GTAGQECRQYALPPQPAMSATALLQKAAQMGATATNASLLRGLGVVSSSSSAGQQHWNGQ
QFESGSASLAAGLGLGLPYDGGSGLKELMMGTPSVFDPKYTTLDLLGLGMAAGGGPTGEL
SALMTSIGGGLDASTSFGTAEYSGEKYGRSS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaattatagatagctctgctgccgtgaatgatacaactgcttctggtgatgct
agtgtattgtcttcaggtgatcaaatgcctcccccgaaagccgagaagaagaagcggaat
ttacctggaatgcctgatcctgatgcagaggttattgctttgtcaccaaagactttgatg
gctacaaatcggtttgtctgtgaaatttgtaataaagggtttcagcgtgatcagaatttg
cagcttcacagaaggggacataatcttccatggaagttaaggcagaggtcaagtaaagag
attcgtaagcgagtctatgtttgtcctgaggagtcatgtattcatcacgatccttctcga
gcattgggtgatcttacggggataaagaagcattattttaggaagcacggtgagaagaag
tggaaatgtgaaaaatgctcgaagaagtatgctgttcaatctgattggaaagctcactcg
aagatttgtggaaccagagagtataaatgtgactgtgggactttgttttctagaagagat
agtttcatcacgcacagggcattctgcgatgctttagctgtggagagtgctaaagaacca
gttgcacctcccagcgtggaagaagaacctgaacctcaaactgttgatgcatcaccacca
tcgccgctgccgccgcagcagccgtcatccccgccttcagttcccacctcaagtgctgcg
acatctatgggtttgcctgatcaaactgcagctatcgattcagcacagttacaagaaaat
cctgtttcgaaatcaacacagatcttagatgatacaccgacagtggttcaggtggcaagc
ttgactggaagctgtagcagtattagcagttcaagcagcaatgggagtacaagaagtacc
gttttcgccagcttgtttgcttcatctacagcgtctggaagtatgcagtctcaagcaact
ggatttactgattttattcatgctacggctcaagctgatcctatgcatgatatgggacca
tccttatcaatagaaccaacttcccttagcctcgcgaccaatcacgggtcatccatcttt
gggactgcagggcaagagtgtcggcagtatgccctgccaccacaaccagcaatgtctgca
actgcattactgcagaaagcagctcaaatgggtgcaaccgccacaaatgcatccttactc
agggggcttggagttgtttcttcttcatcttccgctgggcagcaacactggaatggacaa
caatttgagtcggggagtgcatcattggctgcaggactaggacttggtctgccatatgat
ggaggatcaggtttaaaagaattaatgatgggaactccatctgtatttgatccgaagtac
actactcttgatctactggggttgggaatggctgctggtggtggaccaactggtgagcta
tcggctctgatgacatctattggtggtggccttgatgcatcaacttcatttggaactgca
gaatattcaggagaaaaatatgggaggagctcctga
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