Daucus carota (carrot): 108223843
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Entry
108223843 CDS
T05350
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108223843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108223843
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
108223843
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_30
AAA_21
RsgA_GTPase
AAA_29
AAA_5
AAA_25
AAA_15
AAA_28
AAA_23
Rad17
AAA_33
Motif
Other DBs
NCBI-GeneID:
108223843
NCBI-ProteinID:
XP_017253771
UniProt:
A0AAF0X4F0
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All DBs
Position
5:complement(32379156..32386216)
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AA seq
719 aa
AA seq
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MMLATSSLPLFSPRSTPTKRYAFSQPPLLHSRASGPHLPIARFPSHLSSSPTTLTATTPV
CLAYVSGPASDPIVPSNDDLDSSDIVQHHQLPTPTSAISWGLLWALLVPHKLRLLASFAS
LLGCSTCTLSMPIFSGRFFEVLIGARPEPLWILLSKVGVLYALEPIFTVMFVVNMNTIWE
NVMSSLRARIFSSILIRKVEFFDRYKVGELTALLTSDLGSLKSIVSDNISRDRGFRALSE
VTGTICLLFVLAPQLAPILAVLMLVVSVLVALYKRSTMNVFKAHGAAQAYIADCVTETFS
AIRTVRSFGGEKRQMSMFGDQVQSYQNSGIKLGIFKAFNESLTRIAVYLSLMALYCLGGS
KVKAGELSVGTVASFIGYTFTLTFAVQGLVNTFGDLRGAFAATERINSVLSGAEVDEALA
YGLRKDIKKKDALDKSFDMFFVSDPDGDNRSKNMSYMSSLKGDSNVQNLARCGDIYLEDV
HFSYPLRSDVEILKGLNLVLKCGTVTALVGPSGAGKSTIVQLLARFYEPTSGRITVAGED
LRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDYVSKDEVIKAAKAANAHDFIVS
LPQGYDTLVGERGGLLSGGQRQRVAIARALLKNSPLLILDEATSALDTVSEQLVQGALNH
LMKGRTTLVIAHRLSTVQNADQIALCSDGTIAELGTHSELLDRKGQYASLVGTQRLAFE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagccacttcatctctccccctattctccccccgcagcacccccactaaacgt
tatgctttctctcaaccccctctccttcattctcgcgctagcgggccccacctaccaatt
gcacgattcccaagccacctatcttcttctcctacaaccttaacagcaacaactccagtt
tgtctggcttatgtcagtggcccagcttctgaccccatcgttccctccaacgatgatctc
gattcctctgacatagttcaacaccaccagctgccgacacccacttctgctattagttgg
gggctgttgtgggccctcctggtcccacataaactccggctattggcttcatttgctagt
cttcttggttgttctacttgtactctctctatgcctatattttctggtagattttttgaa
gttctgattggggcaaggccagagcctctttggatactgttgagtaaggtgggagttttg
tatgctttggagccgatcttcactgttatgtttgttgtaaatatgaacaccatatgggaa
aatgtcatgtccagtttaagagctcggatatttagcagcatattgattcgcaaggtggag
ttttttgaccggtacaaggtgggtgaactcactgctttattgacatctgacttgggatca
ctgaaaagtattgtgagtgataacatttccagggatcgtggtttcagggcactatctgag
gttactggaacaatatgcttactgtttgttcttgctccacaacttgcaccaattttggct
gtacttatgcttgtcgtctctgttttagtcgcattatacaagcgctcaactatgaatgtt
ttcaaagctcatggtgcggcccaagcatacatagcggattgtgtaactgaaacattttct
gctatacgcactgtaagatcatttggtggagagaaacgtcaaatgtcaatgttcggtgac
caggtgcaatcttatcaaaatagtggaattaagctcgggatttttaaagcatttaatgaa
tcactgactagaattgcagtttatctatcgttgatggctttatattgtctcggaggaagc
aaagtaaaagctggtgagctctcagttggaactgtggcttcctttattggatacacattt
acgctgacttttgctgttcaagggctggttaacacatttggagatcttcgtggagctttt
gctgctacagagagaataaattctgttttatcgggtgctgaagttgatgaagcccttgct
tatggtttgagaaaagatattaagaaaaaagatgcccttgataaaagctttgacatgttt
tttgtcagtgatccagatggagataatcggtctaagaatatgagttacatgtcatccctg
aaaggagatagcaatgtgcaaaatcttgcaagatgtggtgatatatatcttgaagatgtg
cacttctcttatcctctgaggtctgatgtggaaatcctaaaaggtctgaatctggtgcta
aaatgtggaacagtaactgctctggttggtccaagtggtgcaggaaaaagtacaatagtt
caactattggcacgattctatgagccaacaagtggtagaatcacagtagccggggaggac
ctacggacatttgataagagtgaatgggctcgcgttgtctccatagtaaatcaagaaccg
gtactattttcggtatccgtgggagaaaacatcgcatatggactcccagatgattatgta
tctaaggatgaagtaataaaagcagcaaaagccgcaaatgctcatgatttcatagtttca
cttccacagggctatgacacacttgttggtgaaagaggtggtctgttaagtggaggacag
agacagagagttgctattgctagggctttgctaaagaattccccacttctaatacttgat
gaggccacaagtgccttagacactgtgagtgagcaactggttcagggtgctctgaatcac
cttatgaagggaaggactacattggtgattgctcataggttaagcacagttcaaaatgca
gatcaaattgctctttgttctgatggtactattgcagagcttgggacccattctgagttg
ttagataggaagggtcaatatgcttctcttgtggggactcaaaggcttgcatttgagtga
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