Daucus carota (carrot): 108223853
Help
Entry
108223853 CDS
T05350
Name
(RefSeq) protein argonaute MEL1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108223853
03036 Chromosome and associated proteins [BR:
dcr03036
]
108223853
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108223853
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108223853
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108223853
microRNA pathway
RISC loading complex
108223853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108223853
NCBI-ProteinID:
XP_017253783
UniProt:
A0AAF0X5C1
LinkDB
All DBs
Position
5:38164250..38171071
Genome browser
AA seq
1002 aa
AA seq
DB search
MSGRGRSGGRFDGARGGGRGDGGRGVGRGDGGRGGGRGDGGRGGGYGGRGGDSGGRGGYA
GGAGGRGGGGYPQNAPPPAYGRGGNVPAPVGQPAPRPVVQSPAPAQYTAASSSSAAALSS
DVEKMTIGSSSGSSGQEIVVTQQPPAQPPASSKATRLPVRPGYGREGRRCIVRANHFLVK
VADNDLHHYDVTIKPEVTNKKVCREIMITLDKTYRQSHLSNKQLAYDGSKSAYTAGPLSF
QSKEFIVKLEDKDRGGRKEREFRVSIKFASRPDLHHLRQFLASRQLDVPQETIQLFDVVL
RATPSNKNAVVGRSFFNTLFGKGDLGEGLEYWKGFYQSLRPTQMGLSLNVDMSARAFYDP
VSVSDFVGKYCKLSDLNRALSDVDRVKVKKALRGIRVEFSHGDYMRRYKVLNISTHPLRQ
LTFTDETGGTMHVADYFRKKYNINLRYTSLPALNAGTDAKPIYMPMEVCKIVKGQRCAKK
LNERQVTNLLKATCQRPIDREASIMEMTRQNGYNGDELVNEFGIQVGREMTSIDARVLNP
PRVKYHPTSRESIVEPFVGQWNMIDKKMVNGGVVKSWTCVNFSRNNLDVVHNFCNQLVKM
CRSRGMDFNPQPLIPIRAGNARNIANTLNEIERDSRTRLEKEEHLQMLIIVLPDFSGSYG
EIKKICETNLGIVSQCCQPKHVFKCNMQYLENLSLKINVKVGGRNNVLVTAPPVVRDCPT
IIFGADVTHPPPGEDSSSSIAAVVASMDWPEVTKYRGLYSAQGHREEIIRDLYSTRETEK
GVVASGMIRDHLMEFYKKTRYQPRRIIFYRDGVSEGQFNQVLLEEMDAIRKACQSLSTDY
LPPVTFVVVQKRHHTRLFPNTHNDKRSTDRSGNILPGTVVDTAICHPTEFDFYLCSHAGI
QGTSRPTHYHVLYDENKFSADGLQALTNNLTYTYARCTRSVSIVPPAYYAHLTAFRARYY
MEGIISDGGSSSSDARATREGSSAVRSVPATTANVKDVMFYC
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggtaggagtggtggacgcttcgacggtgcgaggggcggtggccgtggc
gacggcggtaggggcgttggtcgtggcgacggcggtaggggcggtggtcgtggtgacggc
gggcgtggcggtggttatggtggaagaggtggtgattctgggggaagaggcggttatgct
ggtggtgccggggggagagggggtggcggttatcctcagaatgcgccaccgccggcgtat
ggacgtggcggaaatgttcctgcaccggtgggtcagccggcgcctcgcccggtggttcaa
tccccggctccggcgcagtatactgcggcatcgtcatcgtctgcggcggctctgagtagc
gatgtggagaaaatgacaatcggatcgtcttctggttcttccggacaggagattgtggtg
acgcagcaaccaccggcgcaaccgccggcgtccagcaaagcgacgagattgccggtgagg
cccggttatggaagagaaggccggagatgcattgttcgcgctaatcattttctcgtcaaa
gtcgccgataatgatttacatcattacgacgttacaatcaagcctgaagttacaaacaaa
aaagtatgcagagagataatgataactcttgataaaacttaccggcagtctcacttgagc
aacaaacaattagcttatgacgggagcaaaagtgcatacacagctgggccattgtctttc
caatccaaagaatttattgttaaattggaggacaaagatcgtggtggaagaaaagaacgg
gagttcagggtctccattaagtttgcttcgcgacctgatctgcatcatcttaggcaattc
ttggctagcagacaacttgatgttccacaggaaacaatacaattgtttgatgtggtttta
agggcaacaccatcaaacaagaatgcagttgtaggtaggtctttcttcaatactttattc
ggaaaaggtgatctaggagaagggttggagtattggaaagggttctaccaaagtctacga
ccaactcaaatgggcctgtcacttaacgttgatatgtctgccagagcattttatgaccct
gtgtcagtgtctgactttgttgggaaatactgtaagttgagtgatttaaacagggctctt
tctgatgtagaccgagtgaaggttaaaaaggctttgagagggatcagggttgagttttct
catggggactatatgagacgatacaaggtgttaaacatatctacacatcccttgagacag
ttaacgttcacagatgagaccggggggacgatgcatgttgctgactacttccgcaagaaa
tacaatatcaatctgagatatacatccttgccagcacttaatgctggaactgatgcaaag
cctatatatatgcctatggaggtttgcaaaatagtcaaaggtcaaagatgtgccaagaaa
ttgaatgagcgtcaagttactaatctcttaaaagcaacctgtcagaggccaattgataga
gaagcaagtattatggagatgacaagacagaatggatacaatggcgatgagcttgttaat
gaatttggcattcaagtggggagggaaatgacttcaattgatgcacgcgttcttaatcct
ccgagagttaagtatcatcctacaagcagagaatcaatagtggaaccatttgtaggtcaa
tggaatatgattgataagaaaatggttaatggtggtgtagtgaaatcttggacatgtgtc
aacttctcaagaaataatcttgatgttgttcacaatttctgtaatcagttggtcaaaatg
tgtagaagccgaggaatggacttcaatccacagcctctgatcccaattcgagcaggtaat
gctcgtaatattgcaaacaccttgaatgaaatagagagggacagccgaaccagactcgaa
aaggaagaacatcttcaaatgctgatcattgttttacctgattttagtgggagctatggt
gaaatcaaaaaaatttgtgaaacaaatttgggaattgtttcacagtgctgtcagccgaaa
cacgtgttcaagtgtaatatgcagtatcttgagaatttgtcgcttaaaattaatgtgaag
gttggagggaggaataatgtattggtaactgctcctcctgtcgtaagagattgtccaacg
atcatatttggagcagatgtgactcatcctccgccaggggaggactccagttcatctatt
gcagcagtagtggcatcaatggattggcccgaggtcacgaaatacagaggactgtattca
gctcagggtcaccgcgaggaaataataagggatctctacagcacgcgggaaactgaaaag
ggtgttgttgctagtggaatgatcagggaccatttgatggaattctacaagaaaacaaga
tatcaacctagacgaatcatattctacagggatggagtaagcgaagggcagtttaatcag
gtcttgctggaggagatggatgccatcaggaaggcttgccagtctctatcaacagattat
ttacctccagtgacctttgtggtcgttcagaagaggcaccacacacggctttttcccaac
actcacaatgataagagatcaactgataggagtggcaacatattacctggtactgttgtt
gatactgctatttgccatccgacggaatttgatttttatttgtgcagccatgctggtata
cagggcactagtcgtccaacacattatcatgtcctgtatgatgagaacaaattttctgct
gatggtcttcaggctttaactaacaacttgacgtatacgtatgcaagatgcacccgttct
gtttcgattgttccgccagcctattacgcccatctgactgcattcagggcccgctactat
atggaagggatcatttcagatggcggctcaagtagtagtgatgccagagctaccagggag
gggagttcagctgtgcggtctgttcctgctaccacagctaacgtgaaagatgtaatgttt
tactgctaa
DBGET
integrated database retrieval system
