Daucus carota (carrot): 108223923
Help
Entry
108223923 CDS
T05350
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
dcr03015
mRNA surveillance pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108223923
09122 Translation
03013 Nucleocytoplasmic transport
108223923
03015 mRNA surveillance pathway
108223923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108223923
03041 Spliceosome [BR:
dcr03041
]
108223923
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
108223923
Spliceosome [BR:
dcr03041
]
Common components
Common spliceosomal components
Cap binding complex
108223923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
108223923
NCBI-ProteinID:
XP_017253885
LinkDB
All DBs
Position
5:26607108..26613640
Genome browser
AA seq
265 aa
AA seq
DB search
MALLFKDPNKISAYRDRRFQGSQEEFEHALLTSTTVYVGNMSFYTTEEQAYELFSRAGEI
KKIVMGLDKNTKTPCGFCFIMYYSRDDAEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRELVDYGVGSLGSFPPVMPSNYGRNS
GRQGYGGSSRQGRGDYQRKRHREDDRFGPEITKRTSDHDSRRNSDHDSRPEKNPRFRESG
DQEKNPRFRESGDSDEDEDDRKRRP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggccttactgttcaaggatccaaacaagatctctgcgtatagggatagaaggtttcaa
ggttcacaagaagaatttgagcatgctctcctgacttcaacaactgtttatgttggcaac
atgtctttctacacaactgaagaacaagcatacgaactgttctctcgagctggagaaatc
aaaaaaatcgtaatgggattagataagaacactaaaactccttgtggtttttgctttatt
atgtactattctagagatgatgctgaagatgctgttaaatatataagtgggacaatactt
gatgatcgacctattcgtgtggattttgattggggttttcaagaaggaagacaatgggga
cgtggtcgaagtggtggccaggtgcgcgatgaatatcgcactgactatgatcctggcaga
ggtggttatggaaaattagttcagaaggagctggaagcacaaagggaactagtagattac
ggtgtagggtctctgggctcttttccacctgttatgccatctaattatggtagaaacagt
ggaagacagggctatggcggttctagtcgacaaggtagaggagattatcagcggaagaga
catcgggaagatgaccgttttggaccagagatcaccaaaagaacttcagatcatgattct
cgtagaaattctgatcatgactccagaccggaaaagaatccacgtttccgagaaagtggt
gaccaggaaaagaatccacgtttccgtgaaagtggcgattctgacgaggatgaagacgat
cggaaaagacgcccttag
DBGET
integrated database retrieval system