Daucus carota (carrot): 108223952
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Entry
108223952 CDS
T05350
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108223952
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108223952
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108223952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8
zf-ANAPC11
PHD_NSD
zf-RING_Vps41
Prok-RING_4
DUF4187
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108223952
NCBI-ProteinID:
XP_017253920
UniProt:
A0AAF0X2H3
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All DBs
Position
5:complement(11575786..11581618)
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AA seq
544 aa
AA seq
DB search
MGHRNIPYSGPVTDIEMDQHGQAHFSPYGSIANFPQPNAILAAPGNRNNFDVHHLPEHHG
SYGMPLYNSVQHQYPARDIDFVASAASNHYSMYMAPSSSARGFPVPLNSGPFDQFLSSSH
HGIDFSADNYARNAQFMDGLGGSFKRKNAEVLPRNFQYYSSAGASSSVAPIIARPVESDF
GPREVSFTVPDSRGNDLSSVMDVGSHRSMRNRPSSVGVDSLVPHNPNHLIRAQYPGQAFQ
TAATPWMDQQFNGNAGDAGTLTWNQTHTLPYLHGNFNGSCMEAANIGVHAYQVTANRSPA
ALFPPPPILPGHFNLHHPSPPLPPLQGARGRSLELHPQVVTSSQRPSTSGTAQASMNAIQ
DSGEMICRFVGSGQPGGLRIYRPQRRELMLDATARQRNLHHLRVLPEDGVALLELSDYNG
MGDSVDHHREMRLDIDNMSYEELLALGEQIGSVGSGLSEEFITGRLKSNTYTLSRSSSNV
GDATSMDQELNFCVVCQTEYKDEEKMGILDCGHEYHLECIKKWLLVKNTCPICKSAALTT
ESEE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggggcaccgaaatataccatatagtggaccagtgactgatatcgaaatggatcaacat
ggccaagcgcattttagtccatatgggagcatagcaaactttccgcaacctaatgcgata
ttagcagcaccaggaaaccgaaataactttgatgttcatcatctccctgagcatcacgga
tcctatggaatgccactgtacaatagcgttcagcatcaatatcctgctcgtgatattgac
ttcgtggcttcagctgcatccaaccactatagcatgtacatggccccttcatctagtgcc
agaggtttccctgtaccgctgaatagtggtccttttgaccagtttctatcatccagccat
catgggattgatttttctgccgacaactatgccagaaatgcgcagtttatggatgggttg
ggaggttcttttaaaagaaaaaatgcagaagttctcccaagaaattttcagtattattcc
tcggcgggtgccagttcttcagttgctcctattattgctagaccggttgaatctgatttt
ggtccaagggaggtatcttttacagtgcctgacagcagaggaaatgacttgtcatctgtg
atggatgtcggatctcatagaagtatgagaaatagaccaagttctgttggtgtcgattct
ctagtacctcataatcccaaccatttgatccgagcacagtatcctggccaagcttttcag
acagctgccactccttggatggatcagcaatttaacggtaatgctggtgatgctggcact
ttgacttggaaccaaacacatacgttaccctatctacatgggaacttcaatggaagttgt
atggaggcagctaacatcggtgtacatgcatatcaagttacagctaacaggagtcctgca
gctttgtttccgcctcctcccatactcccagggcacttcaatcttcatcatccatcacca
ccgctaccaccattgcaaggtgctcgagggcggagtcttgaattgcatcctcaagtagta
acatcctcacaaagaccttcgacaagtggcacagcacaggctagtatgaatgctattcaa
gattctggagaaatgatttgtagatttgtgggatccggtcaaccaggtggtctacggata
tatcggcctcaacgaagggaactgatgcttgatgcaactgcaaggcaacgcaatcttcat
cacttaagagttctgccagaagatggagttgccctcctggagctctcagactataatgga
atgggtgattctgttgatcatcacagagaaatgcgtctagatattgacaacatgtcgtat
gaggagcttctggcactaggagaacaaattggcagtgtgggcagtggcttgtctgaggaa
tttatcactggccgtctaaaatcaaatacatatactctttccagatctagttctaatgtg
ggagacgcaacatctatggatcaggaacttaacttctgtgttgtatgccagacggaatac
aaggatgaagagaaaatgggtatcctcgattgtgggcatgagtatcatttggaatgtata
aagaaatggcttcttgtaaagaacacttgtcccatatgcaaatctgcggcattgaccaca
gaaagcgaggaatga
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