Daucus carota (carrot): 108224456
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Entry
108224456 CDS
T05350
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108224456
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
90S particles
Other 90S particles
108224456
Pre-60S particles
Other pre-60S particles
108224456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_WDR11_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
108224456
NCBI-ProteinID:
XP_017254578
UniProt:
A0AAF0X890
LinkDB
All DBs
Position
6:652841..658785
Genome browser
AA seq
492 aa
AA seq
DB search
MIAAVSWIPKGVSKPVPEAAEPPSKEEIEKLIKSGVLEESGDGESEQDDEGMDVEAVEEP
DEVARALAAADAMGKSSKSIGFEDIADGLRELDMDNYDEEDDGIELFSKGLGDTYYKDNE
EDPYLKDDGNDSEELEDMVIKAEDSVIICARNEDDLSHLEIWILEDIVDDDQNMFIHHDI
ILPAFPLCTAWLDCPIKGGEKGNFVAVGSMDPAIEIWDLDIMDEVQPSLILGGIAEEEKK
KKKGTKKSIKYKKGSHTDSVLGLAWNKEYRNILASASADKTVKIWDVATGECNITMEHHT
DKVQAVAWNNHAPQVLLSGSFDHSVVMKDGRIPEHTGFKWSVNADVESLTWDPHTEHSFV
VSLENGTVSGFDIRAAKADASGPKPSFTLHAHDKAVSSISYNPRIPNLLATGSTDKMVKL
WDISNNQPSCLASKNPKAGAVFSIAFSEDSPFLLAIGGSKGKLELWDTITDAGISRKYGN
YSSQKKNSTSND
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagctgtttcttggatccctaagggggtttcaaaacctgtgccggaagcagcc
gagcctccttcaaaggaggaaatcgagaagcttataaagagcggagtattggaagaaagt
ggagatggtgaaagtgaacaagatgacgaaggtatggatgtggaggctgtcgaggagcct
gatgaggttgctcgagcattagcagcagctgatgccatggggaagtcatctaagagtatc
ggttttgaggacattgcagatggtttacgagaattagatatggataactatgatgaagag
gatgatggcatcgagctttttagtaagggactgggggacacttactacaaggataacgaa
gaggatccatatctgaaggatgatggtaatgactctgaagagcttgaagatatggtaata
aaagccgaggactctgtgataatatgtgcacgtaatgaggatgatcttagccatcttgag
atctggatattggaagatatagttgatgacgatcaaaacatgtttatccatcatgatatt
atactcccggcatttcccctctgcacagcatggcttgattgcccaataaaaggtggagaa
aaagggaactttgttgctgttggatcaatggacccagcaattgagatatgggatcttgac
attatggatgaagtacaaccatccctgatactaggaggtattgccgaggaggagaagaag
aaaaaaaagggaacaaagaaatctattaaatacaaaaaaggcagtcacacagattcagtg
cttggacttgcttggaacaaagagtacagaaatattcttgctagtgctagtgctgacaaa
acagtaaagatttgggacgtggccactggagaatgcaatatcacaatggaacaccataca
gataaagtccaagctgttgcatggaacaatcatgctccccaagttcttctcagtggatct
ttcgatcattcagtagttatgaaagacggaagaattccggagcatactggattcaagtgg
tcagtaaatgctgatgtcgagagcctgacatgggatcctcacaccgagcactcatttgtg
gtcagtctggaaaatggcactgttagtggttttgacatacgggctgccaaggctgacgca
tcagggccaaagccaagtttcactctccatgctcatgacaaagctgtttcctctatttct
tataaccctcggataccaaatcttcttgcaacaggttctacggataagatggtaaaacta
tgggatatctccaataatcaaccttcatgtcttgcatctaagaatcctaaagctggagca
gtattttccatagccttctcagaagattccccctttttgctggctatagggggttctaaa
ggaaaattggaactctgggatacaataaccgatgcagggatctctcggaaatacggaaat
tacagtagtcagaaaaagaactcgacgtcaaatgactaa
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