Daucus carota (carrot): 108224486
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Entry
108224486 CDS
T05350
Name
(RefSeq) sister chromatid cohesion 1 protein 2
KO
K06670
cohesin complex subunit SCC1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108224486
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108224486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
108224486
NCBI-ProteinID:
XP_017254616
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All DBs
Position
6:complement(24048056..24058318)
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AA seq
702 aa
AA seq
DB search
MFYSQELLSKKGALGTIWAAAHSLKKLTKEDVFDSNISSFVDKILLDEVPAATYRILAYL
LLGVVRIYSMKVEYLFCDCNNVLSEVRHFITSAKIDADIELMCAPYSSITVPERFELDAF
DLEIIEDLNRDHHTKMQEEITLKDKDDGISSPSFQQSYMEEDTSNLGGFSAVHATCNDHY
SMSNTTAEMVASTLHNIRNLDRSMDKFQNYRFSLEDCLPPMLFDEDEERADPSRKFHEDS
QKDGVEMNPSNSPIMLGDGGIPEGNAELLDDKERADPSRKFHEDSQKDGVEMNPPNSPKT
LGDGGRPEGNAESLDEEHANSANKEFSNFTGLQNEKIQIIPPRCPISIYIDTTPESKVPN
SPGVRTPGLMAVGTPATKEGARVSQKRKSIYDAKEIDIANNVYKAGLDDPGESARVSRKQ
KCLYDANGIVIRNEVYKAGLDDPSELVKKRKKAALRDNANQISEKTFFQPLIPGVSINFR
SLSLLSEKEQKSPEKKDTIITPTKTLSIGSLGSHETPAEISVTPSSHVTNSVSQCYNNTC
GSTNSERLGSATSFASVDREFSAIGDLKFDGSSMSFATVDGELSPVEDPEYDESLTTQEE
EINLCEGDDEQEKYHWSTRTRAVARYLHTEFVARKKRGEDEVVKLSQVVEGKSKKRNARM
FYELLGLATQGFVDVKQDNPYDDISIMETSKCKQPFRADNMA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgttttactcacaagagcttctttcaaagaaaggggctttaggcaccatttgggctgct
gctcattccctcaagaagctcacaaaagaagatgtttttgactccaacatttcttcattt
gtcgataagatattgctggatgaagttcccgctgctacgtatagaattctggcctacctt
cttcttggtgttgtgagaatatactccatgaaagttgagtatctgttttgtgactgcaat
aatgtgctatccgaagtccgtcacttcatcactagcgcaaaaattgatgctgatatcgaa
ttgatgtgtgcaccttattcctctataactgtgccagaaagatttgagcttgatgctttt
gatcttgaaattatagaagatttgaacagagaccaccacactaagatgcaagaagaaatc
actctgaaagataaagatgatgggattagctctccatcctttcaacagtcttatatggag
gaagatacttctaatcttggaggtttctctgctgttcatgctacatgtaacgatcactat
tcgatgtctaacacaactgcggaaatggtagccagcacattgcataacataagaaactta
gacaggagcatggacaaattccagaattatagattctccttagaggactgcctgcctcct
atgctatttgatgaagatgaagagagagcagatccgagtagaaaatttcacgaagatagc
caaaaagatggagtggagatgaatccttcaaactctcctataatgttgggagatggtgga
atacctgaaggcaatgctgaattattggatgataaagagagagcagatccgagtagaaaa
tttcatgaagatagccaaaaagatggagtggagatgaatcctccaaactctcctaaaaca
ttgggagatggcggaagacctgaaggcaatgctgaatcattggatgaagagcatgcaaat
tcagccaataaggaattttctaatttcactggtctgcaaaatgagaagattcagatcatc
ccaccaagatgtcccatttccatttacattgatacaactccagagtcaaaggttcctaat
tctccaggtgttagaactccaggtttaatggctgttggtacgccggctactaaggagggt
gctcgtgtttcacaaaagagaaaaagtatatacgatgctaaagaaattgatatagcgaac
aatgtatataaggcagggcttgatgatccgggtgagagtgctcgtgtttcaaggaagcag
aaatgtctttatgatgctaacggaattgtgataagaaatgaggtatataaggcagggctt
gatgatccaagtgagttggtaaaaaaacgtaagaaagctgcacttcgcgataatgcaaat
caaatatctgagaagaccttttttcagcctttaattcctggtgtttctataaattttagg
tctctctctctcctatctgaaaaggaacaaaagagtccagagaaaaaagatactatcata
actcctacaaaaactcttagtatagggtcccttggtagccatgaaacacctgcagaaatt
tcagttaccccttcatcgcatgtaaccaactcagtttcacaatgttacaataatacatgt
gggtctactaattcggagagactgggaagcgcaacatcctttgcaagtgttgatagagaa
ttctctgccattggggatctgaaattcgatgggagttcgatgtcctttgctactgttgat
ggagaactgtctcccgtcgaggatccagaatatgatgagagcttgacgactcaagaggag
gaaatcaatttatgtgaaggagatgatgagcaggagaagtatcactggtctactagaacc
agagctgtcgcaagatatctgcacacagaatttgttgccagaaagaagagaggagaagat
gaagttgtgaagttgtcacaggtggtggaaggaaagtcgaagaaaaggaatgcaaggatg
ttttatgagctactgggactggcaactcaaggttttgtggatgtgaagcaagataaccca
tatgatgatatatctatcatggagacctccaaatgtaagcagccgttcagagctgataat
atggcatag
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