Daucus carota (carrot): 108224513
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Entry
108224513 CDS
T05350
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108224513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108224513
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108224513
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
PBP1_TM
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
108224513
NCBI-ProteinID:
XP_017254649
UniProt:
A0A164VCR3
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All DBs
Position
6:complement(16226421..16230140)
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AA seq
670 aa
AA seq
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MATLEQQISHIIDEDDDDNEEEDDNNNEEQEEEESSARVAMTRRATCSRDKLWFLGKVLD
PRASRIQEWNQVFLLVCATGLFVDPLFFYALSISEACMCLYVDAYFAITITVLRCMTDSL
HVWNMWLQLKINKHPHAVNADERSRPHDTSSRTVAMRYLKARKGFFFDLFVILPIPQVVL
WIVIPALLEKGSTTEVMTTFLVMFLLQYLPKIYHSVYLLRRMQNLSGYIFGTVWWGIALN
LIAYFVASHAVGACWYLLGIQRATKCLTEQCMKTQSCGPKFLACETNLFYGGKNLVTAST
RLLWGENKEARSLCLIADHDKFGYGAYKWTVQLVTNESRLEKILFPIFWGLMTLSTFGNL
ESTTDWLEVVFIIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNVEWWMRKRHL
PQEFRQRVRNYERQRWAAMRGVDECDMIRNLPEGLRRDIKYHLCLDLVKQVPLFQHMDSL
VLENICDRVKSLIFTKGETISKEGDPVQRMLFIVRGHLQSSQDLRDGVKSCCMLGPGNFS
GDELLSWCLRKPFVERLPLSSSSLETLETTEAFGLEAEDVKYVTQHFRYTFVNEKVKRSA
RYYSPGWRTWAAVAIQLAWRRYRHRLTLSSLSFIRPRRPLSRCSSLGEDRLRLYAALLTS
PKPNHDDFDF
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttgaacaacaaatttcacatatcatcgacgaagacgatgatgacaacgaa
gaagaagacgacaacaacaacgaagaacaagaagaagaagagagctcagcacgagttgct
atgacgagaagagccacgtgcagtcgcgataaactatggtttctggggaaggttttggac
cctagggcctcgaggattcaagaatggaaccaagtgttccttttagtatgcgcaactggt
ttgtttgtagatccgctcttcttttacgccctctctataagcgaagcctgcatgtgttta
tatgtggacgcttattttgcaatcaccatcacggttcttcgatgcatgacggattctctg
cacgtatggaacatgtggttgcagttgaagataaataaacacccgcatgctgtcaatgcg
gacgagagaagccgtccacatgatacgagctcacgcaccgtggccatgcgctacttgaag
gctaggaagggcttcttttttgatctctttgtcatcctacctatacctcaggttgtctta
tggatagtaatcccagcgttactggaaaagggttcgacgacagaagtgatgacaacattt
ctagtcatgtttctactgcagtatttaccaaagatttaccactctgtatacctcttgcgc
agaatgcaaaatctttccggttatattttcgggaccgtatggtggggaattgctctcaat
ttgattgcttatttcgttgcctcccatgctgtaggagcatgttggtacttattaggaatc
cagagagcaacaaaatgcttgacagaacaatgcatgaaaacacaaagttgtggccctaaa
tttttggcttgcgaaaccaatctattttatggaggaaaaaacctggtgacagccagcaca
agactgttatggggagaaaataaagaagctaggtctctgtgtctcattgctgatcatgat
aaatttggttatggagcttataaatggacggttcaacttgtcacaaatgagagccgtttg
gaaaaaatactgtttcccatcttctggggccttatgacacttagcacattcgggaacttg
gagagcaccacagattggttagaagttgtgtttatcataattgttcttacgagtggactc
ttactagtcactatgttaattggtaatatcaaggtgtttttgcatgcaacaacgtcaaag
aaacaggcgatgcagttgaagatgaggaacgttgagtggtggatgagaaagaggcatttg
ccgcaagagtttaggcagagagtgcgcaactatgagaggcagcgttgggctgccatgcgt
ggcgttgatgaatgtgatatgatcaggaatctccctgaaggtcttaggagggatattaag
tatcatctctgtttggacttggtcaagcaggtgcctttgtttcagcacatggatagtttg
gttctggagaacatatgtgaccgtgtcaagtccctcatattcactaagggagaaaccata
tcaaaggaaggtgatccggttcagagaatgctgtttatagtaagaggacacctacaaagc
agccaagatttaagagatggtgtaaaaagttgctgcatgttaggccctggaaacttcagt
ggcgacgagcttttatcatggtgtcttaggaaaccttttgtggaaagattgcctttatct
tcatcatcactagaaactcttgaaacaactgaagcttttgggctagaagcggaagatgtg
aagtatgtaacacagcattttaggtacacatttgtgaatgagaaagtgaagcgcagtgct
aggtattattcgcctggttggagaacttgggcagctgttgcaattcagttggcttggcgg
aggtataggcaccgcttgacgctgagttccttgtcatttataaggccaaggagacccttg
tcaaggtgttcatcacttggggaagataggttaaggctctatgctgctctgttaacttca
cctaagcctaatcatgatgatttcgatttctga
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