Daucus carota (carrot): 108224841
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Entry
108224841 CDS
T05350
Name
(RefSeq) nuclear pore complex protein NUP43
KO
K14305
nuclear pore complex protein Nup43
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108224841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108224841
03036 Chromosome and associated proteins [BR:
dcr03036
]
108224841
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108224841
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108224841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
Beta-prop_EIPR1
WD40_Prp19
WD40
Motif
Other DBs
NCBI-GeneID:
108224841
NCBI-ProteinID:
XP_017255064
UniProt:
A0A164X107
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Position
6:38319950..38328701
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AA seq
354 aa
AA seq
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MAANNPETLQIHRIPQSTYIDAVRWLPPLSVFERFILLAVSDSNSDASLLEIRALNRSNP
SILTPLSSLQLASRTSSLKVCQTPHKPLIAASSFSGSVRFLFVDNVEVGFDGSEHIVPEK
SLHVGPISCIDLGGNELECVSVGEDGRVGLVSVGEGELSVRKVFDSAGLVSYSAVKWASP
TEFVTGGLGFSVQWWDLRKPGAAVSQFKGNWDQGASSGIVHSIDIHPSRKHTCLAGGSSG
TVFTWDIRWPQQPIVLSGAGQDAASARSLSASEVWEVQYDTFTRSSNHRISSTRVLPVMM
CSEDGILAVTEEGEEPIELLVEPCAINCFDIDRQNPSDVICSMEWESVAILSRA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaacaaccccgaaaccctccaaatccaccgcatcccccaatccacctacatc
gacgccgttcgctggctcccccctctctccgtcttcgagcgcttcatcctcctcgcggtc
tccgactccaattccgacgcttccctcctcgaaatccgtgccctaaaccgctctaacccc
tctatcttaacccccctatcttccctccaactggcctcccgcacatcctctctcaaagtc
tgccagaccccccacaagcccctgatcgcggcctcgagtttttcgggttcggttcgtttt
ttgtttgtggataatgtggaggttgggtttgatgggtcggagcatatcgtgcccgaaaag
agtttacacgtgggacccatttcgtgtattgacttggggggaaatgagttggagtgtgtt
agtgttggggaggatgggagagtaggattggtgagtgttggtgagggggagttgagtgtt
aggaaggtgtttgatagtgctggattggtgtcgtatagtgcggtgaagtgggctagtccg
acggagtttgttacgggtgggttggggtttagtgtgcagtggtgggatttgaggaagccg
ggtgcagcggtatctcagtttaaggggaattgggatcagggcgctagctccgggattgtg
cattccatagacatccatccatcacgaaaacacacttgcttggcaggaggctcttctggt
actgtttttacatgggatattcggtggccccagcaaccaatagttctttcaggggctggg
caagatgctgcatcagctcgttcactatctgcaagtgaggtttgggaggttcagtatgac
acttttacacgctcttcaaatcatagaatttcatcgacacgtgttttacccgtaatgatg
tgctcggaagatggaatccttgctgtaactgaagaaggtgaagaacccattgagcttcta
gtagaaccgtgtgctatcaattgctttgacattgacagacaaaatccctcggatgtaatt
tgtagcatggaatgggagtctgtagcaatattgtcgagggcttaa
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