Daucus carota (carrot): 108224910
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Entry
108224910 CDS
T05350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108224910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108224910
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108224910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108224910
NCBI-ProteinID:
XP_017255159
UniProt:
A0A161YHG8
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All DBs
Position
6:38547709..38550337
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AA seq
338 aa
AA seq
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MDEESEQFKVFVGGVSWMTTEESLREHFEKFGTVARVAIARDRYSGAPRGFAFVSFTDQA
AFDSALLVEHHHILGRTVDVKRAIPRSEQCQIESQQSRGLGRNNRSNGHCGNSEQLRTRK
IFVGGLSANLTEEEFRNYFENFGQITDVVVMHDSLTQRPRGFGFITFDSEDSVENVMRTN
FHELGGKKVEVKRAVPKEVTNNGYSGGGSGRSYNGFQQYGYSPRHDLFQGHGHPPPYGVH
PGYGGILGYPYGFYGVSFPSGYGGISYGMPPFAPSTWNSPGMSGFRGYSYAGAPNFYLPH
PNGGVGGRSPSVNRVDDAQLTVDRKSSSTDGGNGLLAN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaatcagagcaattcaaagtttttgtgggcggcgtgtcatggatgacgact
gaggagtcactgcgtgagcactttgagaagtttgggacggtggcgcgtgttgcaattgcg
cgagatcgctactctggggcgcctagagggttcgcttttgtctcgtttactgatcaggct
gcgtttgatagtgctcttcttgttgagcatcatcacattcttggtagaacggtggatgtg
aagagagcaatacctaggagtgaacaatgccaaattgaatcacagcagagtagaggactg
ggtaggaacaatagaagtaatggtcattgtgggaacagtgaacagcttaggacaaggaag
atttttgtagggggtttatccgctaatcttactgaggaagagtttaggaattattttgag
aattttggtcagattaccgatgttgtggtgatgcatgatagtcttacccaacggcctaga
ggttttggctttatcacttttgattctgaggattctgttgagaatgtcatgaggacaaac
tttcacgaattaggaggtaagaaggttgaggtgaagagggctgtgcctaaagaggtaact
aacaatggatattctgggggaggaagtgggagaagttataatgggtttcagcagtatggt
tatagtcctagacacgacctctttcaaggccatggacaccctccaccatacggagttcat
ccgggatatggtggtattcttggctatccatatggtttttatggtgttagttttccgtca
gggtatggtggtatcagctatgggatgcctccttttgcacctagcacatggaacagtcct
ggtatgtcaggttttagaggttactcctatgctggagctccaaatttttacctgcctcat
ccaaatggtggagttggaggaaggagtccatctgtgaatcgtgtagatgatgcacaattg
acggttgataggaagtcttcaagtactgatggcgggaatggtctgctggcgaactaa
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