Daucus carota (carrot): 108224973
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Entry
108224973 CDS
T05350
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108224973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108224973
03036 Chromosome and associated proteins [BR:
dcr03036
]
108224973
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108224973
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108224973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
GH18_BT1044-like
Motif
Other DBs
NCBI-GeneID:
108224973
NCBI-ProteinID:
XP_017255238
UniProt:
A0A161XDM1
LinkDB
All DBs
Position
6:23415655..23422687
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AA seq
346 aa
AA seq
DB search
MSTFGVSNQNPNKSTEVTQPPTDSVSSLCFSPKANFLVATSWDNQVRCWEVMKNGTTLAT
VGKAQIAHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKDLAWI
PELNLLATGSWDKTLRYWDLRQSNPAHVQQLPDRCYALTVKHPLMVVGTADRNLIVFNLQ
NPQAEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHREG
NDIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSNPIPCSSFNNDGSIY
AYAVCYDWSKGAENHNPATAKTNIFLHVPQESEVKGKPRAGASGRK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctttggcgtttcaaatcaaaatccaaacaaatctactgaggtgacacagcca
ccgactgactccgtatccagcttgtgttttagtcccaaggccaattttcttgttgcgact
tcttgggataatcaggtgcgatgttgggaggtgatgaagaatggtactactctcgctact
gtaggcaaggcacaaatagcacatgatcagccggttctgtgctcagcttggaaggatgac
ggtactactgttttctctgggggctgtgacaagcaagtgaaaatgtggccattattgtct
ggcggtcagccagtaactgtggctatgcacgatgctcctgtcaaggatcttgcttggatt
ccagagctgaacctcttggccaccggaagctgggacaagacattaagatactgggatctg
agacaatctaatcctgctcatgttcaacaactccctgatcggtgctatgcacttacagta
aaacatccactgatggttgtcggcacagcagatagaaatctgatagtttttaacttgcag
aaccctcaggctgagtttaaaagaattgtttcacccctcaagtaccagacaagatgtgta
gctgcctttccagatcagcaaggttttttggtgggctctattgaaggaagggttggagtc
catcatcttgatgatgcgcagcaaagtaaaaactttactttcaaatgccacagggaggga
aatgatatatactccgtcaactcactaaactttcatcctgttcatcacacatttgcaact
gccggatctgatggtgcctttaatttctgggacaaagatagcaaacagagactgaaggcc
atgtcaaggtgcagtaatcctataccttgcagttcattcaacaatgatggctcaatatat
gcgtatgcggtatgttatgattggagtaaaggtgctgaaaatcataacccagcaacagca
aagaccaatattttcctgcatgtcccacaagagtctgaggtgaagggcaaaccacgagca
ggagctagtggcaggaagtag
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