Daucus carota (carrot): 108225039
Help
Entry
108225039 CDS
T05350
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00270
Cysteine and methionine metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108225039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108225039
03032 DNA replication proteins [BR:
dcr03032
]
108225039
03036 Chromosome and associated proteins [BR:
dcr03036
]
108225039
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
dcr02048
]
108225039
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
108225039
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108225039
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
108225039
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108225039
Prokaryotic defense system [BR:
dcr02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
108225039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
108225039
NCBI-ProteinID:
XP_017255328
LinkDB
All DBs
Position
6:complement(39892064..39902785)
Genome browser
AA seq
851 aa
AA seq
DB search
MPRKRAAPKSNGEQADAQKSRSSKRSKGDAIKEEEDFVLQISDAEENDEEELVQSKDEQE
VEMNMVRKPKRLENEEPSFFIGEPINVDEAKRRWPDRYLAEIRGGMEAPRSISNPEKCQA
RRHYKEARVDGHVSFALGDDAHVMAGDGADNYICRIIEMFEGVDGEPYITAQWFYRAKDT
VIKDCSNLIDKKRVFLSNIKDDNHLDCLLEKIKIVQLSLNADLDTKMKTVAKCDYYYDML
YHVPFSTFLNAKHDDTKDENDSASAISSENDANQDEGNKNQKEMNLLDLFSGCGAMSTGL
CLGANLSGVKLVTKWAVDLNQYACQSLKYNHPETEVRNEKAEEFLALLKEWQRLCAYFSL
IEDKGFQKKYVSPEITNNDENDEEVEVDDEEIFEVEKILSICHGLPAGQKKPGLYFKIRW
KGYGEDEDTWEPEDGLSGALDKLKEFVTNGFNSKILPLPGDADIICGGPPCQGISGFNRF
RNYKNPLEDSKNEQLLVYMSIVEYLKPKFVLMENVVDIVKFAKGFLGRYALGRLVGMNYQ
ARLGMMVAGAYGLPQFRMRVFLWGAHHTMKLPQFPLPTHNVVVRGHSPVEFESNVVTYDD
GCAPKLHDKLYLGDAISDLPAVDNNEPRDEMPYGPSPKTEFQKFIRKGKEEMLGSAPPLL
PQSDCLLYDHRPLKLNNDDYERVCHIPFKKGANFRDLKGVRVGPDNKVEWDPDVERVYLS
SGKPLVPDYAMTFVRGTSSKPFGRLWGDETVPTVVTRAEPHNQIIIHPEQNRVLTIRENA
RLQGFPDYYKLFGPIKERYIQVGNAVAVPVARALGYSLGLSVRGSGWSPLQPLFTLPAGF
PICQSHASDEV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaacgagcggcgccaaaatccaacggcgaacaagccgatgcacaaaaatct
cgatcttcaaaaagatcgaaaggcgacgcaatcaaagaagaagaggacttcgttttgcaa
atcagcgacgccgaggagaatgatgaagaggagttggtgcaaagtaaagacgagcaagaa
gttgagatgaatatggttcgaaagcccaagcgattggagaacgaagagccgagcttcttt
atcggcgagcctatcaatgtcgatgaagccaagcgacgatggcctgatcgatatctcgct
gagattagaggaggcatggaggctccaagatccataagtaatcctgagaaatgtcaagct
cgtaggcattataaagaagcaagggttgacgggcatgtatcttttgctcttggtgatgac
gctcatgtcatggccggtgatggagcagataattacatatgtaggataattgaaatgttt
gaaggggttgatggtgaaccctatataactgcccaatggttttacagggccaaagataca
gtaataaaagattgctcaaacctgattgacaaaaaacgggtttttttgtccaatatcaaa
gatgacaaccatttggattgtttacttgaaaagattaaaattgttcaactttcgctaaat
gctgatttagatactaagatgaagactgttgcaaaatgtgactactattatgacatgttg
taccatgtcccgttttcaacattcctaaatgccaagcatgatgacactaaagacgaaaat
gattctgcttctgcgatctcaagcgagaatgatgccaatcaagatgaagggaacaagaac
cagaaggaaatgaacttgttggacctgttttcaggatgcggtgcaatgtccactggactt
tgtctcggtgccaatttgtcaggtgttaaacttgttacgaaatgggcagtagacctgaac
caatacgcatgccagagcctaaaatacaaccatccagagactgaggttagaaatgagaaa
gctgaagaatttttagctcttctaaaagagtggcaaagactgtgtgcctacttttcctta
attgaagacaaaggctttcaaaaaaaatatgtatctcccgagattacaaataatgatgaa
aatgacgaggaagtagaagtagacgatgaggaaatttttgaggtagagaagattttatcc
atatgccatggccttcctgctgggcagaagaaacctggattatatttcaagattcgctgg
aagggatacggagaagatgaagacacatgggagcctgaagatggcttaagtggggctctg
gataagcttaaggagtttgttacaaatggcttcaattcaaagattctacctttgcccggt
gatgctgatatcatatgtggaggtcctccatgccagggaattagtggtttcaaccgcttc
aggaactacaaaaatcctttagaagactcaaaaaatgagcaacttctggtttatatgagt
attgtggagtacttgaagccaaagtttgttttgatggaaaatgttgttgacatagtcaaa
tttgctaaaggtttccttggaagatatgcgttaggccgccttgttggtatgaattaccag
gctcgcttgggtatgatggttgcaggggcttatggcctccctcaatttcgcatgcgtgtt
ttcttgtggggtgctcatcatacaatgaagctgcctcagttcccattacccactcacaat
gttgttgtgagaggacattccccagtggaattcgagtcaaatgtggtcacctatgatgac
ggttgtgctccaaaattacatgacaaattgtacttgggggatgcaatttctgatcttcca
gctgtggacaataatgaaccccgtgatgaaatgccatatggcccttctcctaaaactgaa
tttcagaaattcatcaggaaagggaaagaagagatgctaggttcagcaccaccactgcta
ccacagtcagactgccttctttatgatcatcgtcctcttaaattgaacaatgatgattat
gagcgagtttgtcatataccatttaaaaagggggccaattttagggatcttaaaggggtg
agagtcggacctgataataaagtggaatgggaccctgatgttgaacgtgtttatttgtcc
tcaggaaagcctttggtccctgactatgctatgacatttgtgcgtggaacctcttccaag
ccatttgggagattatggggggatgagacagtacctactgtagttaccagagctgaacca
cataatcagataattattcatcctgaacaaaatagagtcctcactatccgtgagaatgct
agactgcagggctttcctgattattacaagctctttggtcctattaaggaaaggtacatt
caagtgggcaatgctgttgctgttcccgtggcaagagccctcggatactcattgggacta
tcagttagaggcagtggctggtctcctttgcaacctttattcactttgccagcaggattt
cctatttgtcagtctcatgcttctgatgaagtttga
DBGET
integrated database retrieval system
