KEGG   Daucus carota (carrot): 108225327
Entry
108225327         CDS       T05350                                 
Name
(RefSeq) DNA polymerase epsilon subunit B isoform X1
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03030  DNA replication
dcr03410  Base excision repair
dcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108225327
   03410 Base excision repair
    108225327
   03420 Nucleotide excision repair
    108225327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dcr03032]
    108225327
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108225327
Enzymes [BR:dcr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108225327
DNA replication proteins [BR:dcr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    108225327
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      108225327
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT
Other DBs
NCBI-GeneID: 108225327
NCBI-ProteinID: XP_017255657
LinkDB
Position
6:3044849..3051276
AA seq 527 aa
MSAAMRKLIQKKFKMRGYTLKVEALNEILPFLSKFKDAEDEALDLLLDELQHQSLKSSIL
DKESVSRVVSLLLEAEAAAEDTPASTSATGALRIIDAFIVPKYRYDPIKKIFLEHTGRLP
IHGDASAKATLYRDRFLLLFQRLSRDPHFSRPAFDTDLSQFGNCQISPIQSLVGRTGKCW
VMGVISQLEDGHFYLEDLTAAVEINLSNAKITTGFFSENTIVLAEGEMLLDGMFQVKTCG
FPPLEDREKSSGLFSGIDFFGSGKLAKEETLRLAELETRAVNDMFVILSDIWLDNEDTMK
NLQTVLDGYENVEVVPSLFVFMGNFCSHPCNLSFSSYSTVRMQFEKLGQIIAAHNRLLEH
SRFLFIPGPDDAGPSTVLPRCPLPNYLTEELQKHVPNAVFGSNPCRIKFYTQEIVFFRQD
LLYRMRRSCLMPPSSEETSDPFEHLVATITHQSHLCPLPLSKQPVIWNYDHCLHLYPTPH
TIVLGDKSEQKAFNYTGITCFNPGSFSNDSTFVAYRPCTREVELSSL
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgagcgccgcaatgagaaaattgatacaaaagaagttcaaaatgagaggctacactctc
aaagtcgaagctttaaacgaaatcctccctttcttatccaaattcaaagacgccgaagac
gaagccctagatctcctcctcgacgagcttcagcatcaatccttgaagtcatcgattttg
gacaaggagagtgtgagtcgtgttgttagtttgttgttggaagcggaggcagctgctgag
gatacgccagctagtactagtgctactggcgctcttcgtattattgatgcatttattgtc
cccaagtatagatatgatccgattaagaagatcttcttggagcatacggggaggcttcca
attcacggagatgcttctgcaaaagcaacgttgtacagagatagatttttgctgttgttt
caaaggctttctcgggacccacatttctcaaggcctgcatttgatactgatttgtcacag
tttgggaactgtcagatatccccaattcaatctctggttgggcgaacaggaaaatgctgg
gtgatgggagtgatatctcagttggaagatggacatttttacttggaagatctcactgca
gcagttgaaatcaatctgtcaaatgcaaagattaccactggattcttttcagagaacact
atagttttagcagaaggggagatgcttctggatgggatgtttcaggtcaaaacatgtgga
tttcctcctctagaagacagagagaagtcatctggattattttctggaattgacttcttt
ggtagtggtaaacttgcaaaggaggaaactctgagacttgcagagctggaaacaagggca
gtaaatgacatgtttgtcatcctttcagatatttggctggacaatgaggatacaatgaag
aacctgcagaccgtccttgatggttatgagaatgtagaagtggttccttctctttttgtt
ttcatgggaaatttctgctcccatccatgtaacctttcttttagttcttactcaacagtc
agaatgcaatttgagaaattggggcaaattattgcagctcataatagattgctggaacat
agcaggttcttgtttatccctgggcctgatgatgcaggtccttcgacagttctacctagg
tgccctctaccaaattatctaactgaagagcttcagaagcatgttccaaatgctgtgttt
ggaagtaatccatgcagaatcaagttttatacccaagagatcgtatttttccgacaggat
ctgctataccgaatgcgtaggtcatgtttaatgccgccttcatcagaagaaacaagtgat
ccttttgagcatcttgttgctactataactcatcaaagccatttgtgtcctcttccccta
agtaaacaacccgtcatctggaattatgatcattgtctccatctctatccaacacctcat
acgatagtattgggtgataaaagcgagcagaaggctttcaattacacaggaatcacatgc
tttaatcctggttcattttcaaacgacagcacctttgttgcttatcggccttgcacaagg
gaagttgagttgtcttccttgtga

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