KEGG   Daucus carota (carrot): 108225463
Entry
108225463         CDS       T05350                                 
Name
(RefSeq) uncharacterized protein LOC108225463
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03022  Basal transcription factors
dcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108225463
  09124 Replication and repair
   03420 Nucleotide excision repair
    108225463
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108225463
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108225463
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     108225463
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     108225463
SSDB
Motif
Pfam: MAT1 NAD_binding_9
Other DBs
NCBI-GeneID: 108225463
NCBI-ProteinID: XP_017255818
UniProt: A0A164X3B6
LinkDB
Position
6:39184746..39186896
AA seq 185 aa
MVVVAAGTTTFVKEMAIRKRISNIFNKREDDFASLREYNDYLEDVEDMIVNMVEGIDVPA
IEARIAQYQKENAEQIMISQARKAEEYAAALAASRGQPVHNELDAAAGQSFQATSGAGGH
YVPAVAGGTIAQPIPVGSGHEMLGYHFDDEEMMKLKAKNGGKAGGWSIELSKKREFEEAF
GSIWI
NT seq 558 nt   +upstreamnt  +downstreamnt
atggtggtggtggcagctggtaccaccactttcgtcaaggagatggccatccgtaaacgc
atttccaatatatttaataaaagagaagatgattttgcttcgttgcgagagtataatgat
tacttggaggatgttgaggacatgatcgtgaacatggttgaaggaattgatgttcctgcc
attgaagcgaggattgcccaataccagaaagaaaatgctgaacaaataatgatttcccaa
gctcggaaggcagaagaatatgcagcagcattggcagcgagcagagggcagcctgttcat
aacgagttagatgcggctgctggtcagagctttcaagctacaagtggtgcaggtgggcat
tatgtccctgcagttgctggcggtaccatagcacagccaattccagtcggatcgggacat
gagatgctgggttatcactttgatgatgaagaaatgatgaaacttaaagcaaaaaatggt
ggaaaagctggagggtggagcatagaattaagcaagaaaagagaatttgaagaagccttt
ggaagcatttggatatga

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