Daucus carota (carrot): 108225463
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Entry
108225463 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108225463
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03022
Basal transcription factors
dcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108225463
09124 Replication and repair
03420 Nucleotide excision repair
108225463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108225463
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108225463
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108225463
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108225463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
108225463
NCBI-ProteinID:
XP_017255818
UniProt:
A0A164X3B6
LinkDB
All DBs
Position
6:39184746..39186896
Genome browser
AA seq
185 aa
AA seq
DB search
MVVVAAGTTTFVKEMAIRKRISNIFNKREDDFASLREYNDYLEDVEDMIVNMVEGIDVPA
IEARIAQYQKENAEQIMISQARKAEEYAAALAASRGQPVHNELDAAAGQSFQATSGAGGH
YVPAVAGGTIAQPIPVGSGHEMLGYHFDDEEMMKLKAKNGGKAGGWSIELSKKREFEEAF
GSIWI
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggtggcagctggtaccaccactttcgtcaaggagatggccatccgtaaacgc
atttccaatatatttaataaaagagaagatgattttgcttcgttgcgagagtataatgat
tacttggaggatgttgaggacatgatcgtgaacatggttgaaggaattgatgttcctgcc
attgaagcgaggattgcccaataccagaaagaaaatgctgaacaaataatgatttcccaa
gctcggaaggcagaagaatatgcagcagcattggcagcgagcagagggcagcctgttcat
aacgagttagatgcggctgctggtcagagctttcaagctacaagtggtgcaggtgggcat
tatgtccctgcagttgctggcggtaccatagcacagccaattccagtcggatcgggacat
gagatgctgggttatcactttgatgatgaagaaatgatgaaacttaaagcaaaaaatggt
ggaaaagctggagggtggagcatagaattaagcaagaaaagagaatttgaagaagccttt
ggaagcatttggatatga
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