Daucus carota (carrot): 108225729
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Entry
108225729 CDS
T05350
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108225729
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108225729
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108225729
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
Rcat_RNF216
IBR_1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108225729
NCBI-ProteinID:
XP_063935890
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All DBs
Position
6:20941067..20946855
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AA seq
586 aa
AA seq
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MDGYTSSEEENCYSDRDSFDGLDNEESDSQWVPPKPSSIKVITKESLLAAQKEDLRQVME
LLSLREHHARTLLIYYRWDAEKLFAVLVEKGKSALFAQAGVPLVENHELDTSMNSSTVMC
IICIEDVSGREVTKMDCGHCFCNNCWTEHFIVKINEGQSKRIRCMAHKCSAICDEAVIRN
LVSKRHPDLAEKFERFLLESYIEDNKMVKWCPSIPHCGNAIRVEDDEFCEVECKCGLQFC
FSCLSEAHSPCSCRMWELWLKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCIC
GQSFCWLCGAATGRDHTWSNISGHSCGRFKEDMEKNSERAKRELYRYMHYHNMYKAHTDS
FKQESTLRETIREKVENLEKRDPSARDFTWVTNGLYRLFRSRRSLSYSYPFAYYMFGEEL
FKGEMTEKEREIKQNLFEDQQQQLEANVEKLSKCIEEPLDQLPDDRVMNIRMQVINLCVI
TDNLCQKMYECIENDLLGSLLFGIHNIAPYHSKGIEKATELTICHNSKACNAKKADDNGC
TLESQGPSGSGSSDQSGYSSRKRPRKENFGAAFFDLNLPAEVLEGN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggatggttatacgagtagcgaagaagagaactgttattctgatcgagactctttcgat
ggtctcgataacgaagagtctgattctcagtgggtcccacctaaaccttcatctatcaag
gtgattactaaagagtctctcttggcagcacagaaagaagatttgcgccaggttatggaa
ctgttatctttgagggagcatcatgcacggactttgctgatttattatcgatgggatgct
gagaagttattcgcggtacttgttgaaaagggaaaatctgctttgtttgctcaggcaggt
gtacccttggttgaaaatcatgaacttgatacgtctatgaattcctctacggtcatgtgc
attatttgtattgaggatgtatctggtcgggaggttactaaaatggactgtggccattgc
ttttgcaacaattgttggacagagcatttcattgtgaagataaatgagggacaaagtaag
cgtattaggtgcatggctcataaatgttccgccatttgtgacgaagcagtaattagaaac
ttagttagtaaaaggcaccctgatttagcagagaagtttgagcgttttttactggaatcc
tatatagaggataataagatggtaaaatggtgcccaagtatcccacattgtgggaatgct
atacgtgtcgaggatgatgaattctgtgaggtagaatgtaaatgtggcctacaattttgc
tttagttgtctatctgaagcacactcaccttgctcatgccgtatgtgggagctctggtta
aaaaaatgcagagatgaatctgaaacagtgaattggattacagttcatacaaagccttgt
ccaaagtgtcacaaacctgtggagaagaacggtgggtgtaatcttgtcagctgcatctgt
gggcaatctttttgttggctatgtggtgctgcaactggtcgtgaccatacatggtcaaat
attagcggccacagttgcggacgatttaaagaggacatggagaaaaactctgaacgagca
aagcgggagctctataggtatatgcactatcataatatgtacaaggcccatacagattct
tttaagcaggaatctacactaagggagaccatcagggagaaggttgagaatttggaaaag
agagatccgagtgcaagagattttacttgggttacaaatgggctatacagacttttcaga
tccaggcgttctctctcttattcttacccatttgcgtattatatgtttggagaagagctg
ttcaagggtgagatgacggaaaaggaacgggagataaaacagaatttatttgaggaccag
cagcagcagcttgaagcaaatgtggagaagctatcaaagtgtattgaggagccacttgat
cagttacctgatgaccgggtcatgaatataaggatgcaagtaattaatctctgtgtgatt
actgataatctgtgccagaaaatgtatgaatgtattgagaatgatctattgggttctctc
ctatttggtattcacaatatagctccataccattcgaaaggcattgagaaggcaactgag
cttaccatctgtcataattctaaagcctgtaatgctaaaaaagctgacgacaacggatgc
acattggaatcacagggaccatcaggttctgggagttcagatcagagtggttattcttcg
cggaagagaccaagaaaggaaaattttggtgcagcattttttgatctcaacttgcctgca
gaagtcttggaaggaaattaa
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