Daucus carota (carrot): 108225767
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Entry
108225767 CDS
T05350
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03020
RNA polymerase
dcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108225767
09124 Replication and repair
03420 Nucleotide excision repair
108225767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108225767
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108225767
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108225767
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108225767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
108225767
NCBI-ProteinID:
XP_017256206
UniProt:
A0A164VP66
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All DBs
Position
6:complement(21853588..21856958)
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AA seq
319 aa
AA seq
DB search
MDGVASYQRFPTVKIRELKDDYAKFELRNTDASIANALRRVMISEVPTVAIDLVEIEINS
TVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCLGDQTLD
VTSKDLHSSDYTVVPVDFSDASGYENSETRGIIIVKLRRGQELKLRAIARKGIGKDHAKW
SPAATVTFMYEPAIHINQEMMESLTLAEKQSFVDSSPTKVFEIDDETQQVKIVDSEAYAY
DDEVLKKAEAMGKPGLIEIYAKEDSFIFTVESTGAIKASQLVLNAIDILKQKLDAVRLSD
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtcgcatcataccaacgtttccccaccgtcaaaatccgcgagctcaaagac
gactacgccaagttcgagctgcgcaacaccgacgccagcatcgccaacgcgctccggcgc
gtgatgatctccgaggtccccaccgtcgcaatcgacctcgtcgaaatcgaaatcaactcc
accgttctcaacgacgaattcatcgcccaccgtctcggcctcatcccgctgaccagtgaa
cgcgctatgagcatgcgtttctctcgtgattgcgatgcgtgtgatggggatgggcagtgt
gagttttgctctgtggagtttcatttgagggctaagtgtcttggggatcagactttggat
gtcactagtaaggatttgcatagctctgattacacggttgtccctgtcgatttttcggat
gcttcgggctatgagaactccgagactaggggaataattattgtgaagctacgccgtgga
caagaactgaagctgagggcaattgcccgaaaaggaattgggaaagatcatgcaaagtgg
tcacctgctgcaacagtcacttttatgtatgaacctgccattcatattaatcaagagatg
atggagagtttaacactggccgagaaacaaagttttgttgatagcagcccaaccaaagtc
tttgaaattgatgatgaaactcaacaggttaagatagttgattcagaggcttacgcctat
gatgatgaagtgcttaagaaagcagaagctatgggaaaaccaggactcatagaaatatat
gcaaaagaagacagctttatcttcactgttgagtccactggtgcaatcaaagcttcgcag
ttggtgcttaatgctattgatatcctgaaacaaaagcttgatgcagttcgcctgtcagat
gacactgtagaagctgatgatcagtttggggaattaggtgcacatatgcgcgggggatga
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