Daucus carota (carrot): 108225830
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Entry
108225830 CDS
T05350
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108225830
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108225830
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108225830
03036 Chromosome and associated proteins [BR:
dcr03036
]
108225830
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108225830
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108225830
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108225830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
EF-hand_13
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
108225830
NCBI-ProteinID:
XP_017256276
UniProt:
A0A169WR63
LinkDB
All DBs
Position
1:complement(35194569..35203770)
Genome browser
AA seq
474 aa
AA seq
DB search
MHNGSGDGEASASKKIPPATSMLWVRNLRRFIGSGTGLGSEALMELETKRILLDMFKEKQ
QKNAESGSLPSFYKKKPEDGSISHRVQRLAKCRFLKKQSDLLLNADDLDAMWACLRENCV
IDDATGAEKMNYEDFCHIASECTEQIGSKCRRFFSPSNFMKFEKDESGRIAILPFYLYVM
RTVSLTQARIDMSELDEDSDGFLQAHQMKTYISDLIPNLAQLRDMPEAFIDTYCRIAAHK
FFFFCDPQRRGKACIKKVLLSNALQELMELHQESEEEVTDTEQAENWFSLTSAQRICDMF
MALDKDMNGTLSKQELREYADGTLTDIFIERAFDEHIRRGKNGGGNSREMDFENFLDFLL
ALENKDTQEGLTYLFRCLDLHGRGFLTTADIHTLFRDVHQKWIDGGNYELCIEDVRDEIW
DMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPEEE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcataatggctccggcgacggcgaagcatcggcttccaagaagatccctccggccact
tccatgctttgggtccgaaatctccggcgcttcatcggatccggcactggtctcggttcc
gaagctttaatggagctcgaaacaaaaagaatcttgctagatatgttcaaagagaagcaa
caaaagaatgctgaatctggctccctaccaagcttttataagaagaaacccgaagatggt
tccatcagtcacagggtccagaggctagcaaaatgtcgttttttgaagaagcaatcagat
cttttgctgaacgctgatgatttggatgctatgtgggcgtgtttaagagagaattgtgtt
attgatgatgccactggtgctgaaaagatgaactatgaagatttttgccacattgcctct
gaatgtacagaacagataggctctaagtgtcggcggttttttagtccttcaaatttcatg
aagttcgagaaagatgagtctggaagaattgctattctgcctttttatctttacgtaatg
cgtacggtttcacttacccaggcaaggattgacatgagtgagcttgatgaagattctgat
ggatttcttcaagctcatcaaatgaagacctacataagcgaccttattcctaatctggca
caactcagagacatgcctgaagcctttattgacacgtactgtcgcatagccgcacacaaa
tttttcttcttctgtgatccacaaagacgaggcaaggcatgtataaagaaagtgctgctc
agtaacgctcttcaggaattaatggagctgcaccaggaaagtgaggaagaagtgactgac
accgaacaagcagagaactggttttcattgacatcagcacaacggatatgtgatatgttt
atggccctcgataaagatatgaatggcacattaagcaagcaggaactccgagaatatgca
gatggaactttgacagatatattcatcgagagagctttcgacgagcatatccgtcgtgga
aaaaatggaggaggtaacagtcgtgagatggactttgaaaactttcttgactttcttttg
gccctagaaaataaagatacccaagagggattgacatatttgttccgctgtctcgatctc
catggaaggggatttctcactacagctgatattcacactctcttcagggatgtacatcaa
aagtggatagacggtgggaattatgagctgtgtatcgaagatgtacgggatgaaatatgg
gatatggtgaagccagctgaccctttaagaattacactagcagatttgttatcttgtaaa
cagggtggtacagttgccagcatgctcatagacgtccgcggtttctgggctcatgacaat
agagagaatcttctccaagaagaggaagaaccggaagaagaatga
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