Daucus carota (carrot): 108225880
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Entry
108225880 CDS
T05350
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108225880
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108225880
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108225880
03036 Chromosome and associated proteins [BR:
dcr03036
]
108225880
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108225880
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108225880
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108225880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
EF-hand_13
Motif
Other DBs
NCBI-GeneID:
108225880
NCBI-ProteinID:
XP_017256326
LinkDB
All DBs
Position
1:29436846..29445991
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AA seq
449 aa
AA seq
DB search
MYNGSGDGEASASKKIPPATSMLWNRKLRRFIECGTGRALMELETKRTLLDMFKEKQQKN
AESGSLPSFYKKKQSDLLLNADDLDAMWVCLRQNCVIDDATGAEKMNYEDFCHIASECTE
QMGSKCRRFFSPSNFMKFEKDESGRIAILPFYLYVMRMVSLTQVRIDMSELDEDSDGFLQ
PHQMKTYISGLIPNLAQLRDMPEAFISMYCCIAAHKFFFFCDPHRRGKACIKKLLLSNAL
QELIELQEESEEEVTDTEQAENWFSLTSAQRICDMFLALDKDMSGTLNKHELRAYADGTL
TDIFIERAFDEHIGRGKNGGNGREMDFENFLDFVLALKNKDTEEGLTYLFRCLDLHGRGF
LTTADIHTLFRDVHRKWIDGGNYELCIEDVRDEIWDMVKPADPLRIPLADLLSCKQGGTV
ASMLIDVRGFWAHDNRENLLQEEEEPEEE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtataatgggtccggcgacggcgaagcctcggcttcgaagaagatcccgccggccact
tccatgctttggaaccgaaagcttcggcgcttcatcgaatgtggcaccggtcgagcttta
atggagctcgaaacaaaaagaactttgctagatatgtttaaagagaagcaacaaaagaat
gctgaatctggctccctaccaagcttttataagaagaagcaatcagatcttttgctgaac
gctgatgatttagatgctatgtgggtgtgtttaagacagaattgtgttattgatgatgcc
actggtgctgaaaagatgaactatgaagatttttgccacattgcctctgaatgtacagaa
cagatgggctctaaatgtcggcggttctttagcccttcaaatttcatgaagttcgagaaa
gatgagtcaggaagaattgctattctgcccttttatctttacgtaatgcgtatggtttca
cttacccaggtaaggattgacatgagtgagcttgatgaagattctgatggatttcttcaa
cctcatcaaatgaagacctacataagtgggcttattcctaatctggcacaacttagagac
atgcctgaagcctttatttcaatgtactgctgcatagctgcgcacaaatttttcttcttc
tgtgatccacatagacgaggcaaagcatgcataaagaaattgctgctcagtaacgctctt
caggaattaatagagctgcaagaggaaagtgaggaagaagtgactgacaccgaacaagca
gagaactggttttcattgacatcagcacaacgtatatgtgatatgtttcttgccctcgat
aaagatatgagcggtacattaaacaagcacgaactccgagcatatgcagatggaactttg
acagatatattcattgagagagctttcgacgagcatatcggtcgtggaaaaaatggaggt
aatggtcgtgagatggacttcgaaaactttcttgactttgttttggccctaaaaaacaaa
gataccgaagagggattgacatatttgttccgttgtctcgatctccatggaaggggattt
ctcactacagctgatattcacacactcttcagggatgtacatcgaaagtggatagacggt
gggaattatgagctgtgtattgaagatgtacgggatgaaatatgggatatggtgaagcca
gctgaccctttaagaattccactagcagatttgttatcttgcaaacagggtggtacagtt
gccagcatgctcatagacgtccgcggtttctgggctcatgacaatagagagaatcttctc
caagaagaggaagaaccagaagaagaatga
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