Daucus carota (carrot): 108226289
Help
Entry
108226289 CDS
T05350
Name
(RefSeq) ABC transporter B family member 13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108226289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108226289
04147 Exosome [BR:
dcr04147
]
108226289
04090 CD molecules [BR:
dcr04090
]
108226289
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108226289
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108226289
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108226289
CD molecules [BR:
dcr04090
]
Proteins
108226289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
AAA_25
RsgA_GTPase
AAA
Zeta_toxin
AAA_5
AAA_21
AAA_15
Rad17
nSTAND1
Motif
Other DBs
NCBI-GeneID:
108226289
NCBI-ProteinID:
XP_063935423
LinkDB
All DBs
Position
6:35968985..35974457
Genome browser
AA seq
1256 aa
AA seq
DB search
MALQKTDQNELKREKTDEDLKPVAEGVAFRELLSYADGLDWTLMVLGTLGSTIHGLAQPV
GYMLLGKALDAFGENINNDEAMVKALKKVIPFVWYMAIATFPAGILEVGCWMYTSQRQAA
KIRLSFLRAVLRQEVGAFDTDLTNGKITSGISNHMSVIQDAIGEKLGHFLSCFATFFSGV
VIALISSWEVSLLSLLVVPLILIIGATYTKKMNVISAAKTSFLSETTAMVQQTISQIKTV
YAFVGENSAVKSFTERMERQLVLSKGEALIKGVGTGMFQTVTFCSWSLIVWVGAVVVVAK
RSTGGDVLAAVMSILFGAIALTYAAPDMQIFNQATAAGKEVFEVIRRSSAISIDSKGKTL
ELVEGNIDIHNIHFAYPSRPEKRILQGFSLSIPAGKVVALVGSSGCGKSTVISLMARFYD
PAEGEIFIDNNNIKDLDLRFLRKNLGVVSQEPSLFTGTIKENMKLGNTDADDQQIESAAV
MANAHSFISQLPNQYLTEVGQNGVQLSGGQKQRIAIARAILKNPPILMLDEATSALDSES
EKLVQNALETAMQGRTVIVIAHRLSTIVNADMIVVVDNGKVTESGKHHDLLDSSKFYNNL
VNMQNITVEDQTRTIDDTEETSGTELKVSSEQPIKSLELVYHLPDYPEQEKQKEGKSWDI
FFRLWFGLNRNELVKTAIGSFAAAFSGISKPIFGFFIITIGVAYYKPDSKEKVGKYSLIF
SSIGLLSLISHTLQHYFFGIIGEKAMRNLRQALYSAVLRNELAWFDSPKNNVGSLTSRII
SETSTVKTIISDRMSVIVQCISSILIATIVSLRVNWRMALVAWAVMPCHFIGGLIQAKSA
KGFSGDIAAAQSELVALTSEATANIRTVVSFCHEDNVLQKARVYLKKSTSRNRKESVKYG
IIQGISLFLWNVAHAIALWYTTVLVEKKQAKFENGIRAYQIFSLTVPSITELWTLIPTVV
SAISVLTPAFQTLDRQTKIDPDTTEDPPTEKINGEIEFKNIHFHYPLRPEVTILNNFSLH
IESGSKVALVGPSGAGKSSVLALLLRFYVPREGSILIDGKNIEKYNLRKLRTQIGLVQQE
PLLFSCSIRDNICYGNEGASETEIIEVSKNSNIHEFISNLPYGYDTVVGEKGCQLSGGQK
QRIAIARTLLKKPAIMLLDEATSALDAESESAVVNALESIQLNSSGGFLKKTTQITVAHR
LSTIKNSDTIIVMDKGSVVEMGTHSSLKDISEGVYSRFYRLQSVRHKLHRKQGQST
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcaaaaaactgaccagaatgagctaaagagagaaaaaacagatgaggatcta
aagccagttgcagagggagtggcgtttcgtgagctcttgagctatgcagatggactggat
tggacgctgatggtgcttggcacgctgggatcaactatccatggccttgcgcagcctgtt
ggctacatgctgcttggcaaagcccttgatgcttttggtgaaaacatcaacaacgacgag
gccatggttaaagcgttgaagaaggttataccatttgtgtggtacatggccattgctacc
tttcctgctggcatactagaggttggatgctggatgtacacaagtcagaggcaagcagca
aagatacggctctcatttctgcgtgcagtgctcagacaggaggtcggagctttcgacacc
gatttaaccaacggcaaaatcaccagcggcataagcaaccacatgagtgtcatacaagat
gctataggagaaaagttgggccattttctgtcatgctttgcaactttcttttctggagtt
gtgattgctctgatctcaagttgggaagtttcactcctttccctcttggttgttcctctg
attcttattattggagccacatatacgaaaaaaatgaatgtcatttcagctgccaagaca
tcattcttgtccgaaaccacagcaatggttcagcagactatttcccaaatcaaaacagtt
tatgcatttgtgggagaaaattcggcggtcaaatcttttacagaacgtatggagagacaa
ttagtactcagcaagggagaggcgttgataaaaggcgttggaaccggcatgttccaaact
gtgacattctgttcctggtctctgattgtatgggttggagccgttgtggttgtagctaaa
agatcaaccggaggagatgtccttgctgcagtaatgagcattctattcggggctatagca
cttacttatgctgcaccggacatgcaaatcttcaatcaggccacagctgcaggaaaggaa
gtgtttgaggtgatcagaaggagttcagcaataagtatcgactcaaaagggaagacactg
gagctagttgagggcaacattgacatacacaacatacactttgcttatccatccagacca
gagaagcgcatacttcaagggttttcattgtcaattccagcaggaaaggtggttgcttta
gtaggcagtagtggctgtgggaagagcactgtcatctccctaatggcaagattctatgat
cctgcagaaggagagattttcattgacaacaacaacataaaggatcttgatttaaggttc
ctcaggaaaaacttgggagttgtttcccaggagccatcactatttacgggcaccatcaag
gaaaacatgaagttaggaaacacagatgcagatgaccaacagattgagagtgcagcagtg
atggcaaatgctcactctttcatatctcaacttccaaatcagtacttaacagaggtggga
caaaatggtgtgcaattatcaggtggacagaaacagcggattgcaatagcaagagccatt
ttaaagaaccctccaattcttatgctcgatgaggcaacaagtgcacttgattcagaatca
gagaagctggtgcagaatgccctggagactgctatgcaagggagaactgtcatagtaatt
gcacacaggctatcaaccatcgtcaatgcagatatgatcgtagttgtagacaatggaaaa
gttacagagtctggaaagcaccatgatttgttagatagcagcaagttctacaacaaccta
gttaacatgcagaatatcacagtagaagatcaaacaaggactatagatgatactgaagag
acttccggaactgagcttaaggtttcatccgagcaaccaatcaaatctttggagctcgta
tatcatcttccggactatccagagcaagagaagcagaaggaaggaaagtcttgggatata
tttttcagactctggtttggtttaaaccgtaacgagcttgtaaagactgctattggctcc
tttgcagcagctttttctggcatttcaaaacctatctttgggttctttatcataacgata
ggtgtagcatattacaagcctgattcgaaggaaaaagttgggaagtattcattgatcttt
tcttcaataggattgctttcactgattagccatactttgcagcattacttttttggaatc
attggagagaaggccatgagaaacctaagacaagctctctattcagctgtgctaaggaat
gaattagcctggttcgatagccctaagaacaatgttggttcacttacttcacgaattatc
agtgaaacctccactgtcaagacaatcatctctgatcgtatgtccgtgatagttcaatgc
atttcctcaatactcattgcaacaattgttagcttgagagttaactggagaatggctcta
gtagcttgggctgtgatgccttgccacttcattggtggtctgattcaagccaagtctgca
aaaggattttcaggcgacattgctgcagcacaatcagaacttgtcgctcttacttctgaa
gccactgcaaacattagaacagttgtttccttttgtcatgaagataatgtacttcagaaa
gccagagtgtatctcaagaaatcaacaagtaggaacagaaaggaaagtgttaaatatggg
atcattcaagggatatcccttttcttatggaatgttgctcatgctattgctttatggtac
actactgtcctggttgagaaaaagcaagcaaaatttgagaatggaatcagagcgtatcag
atattctccctcacggtaccctcaatcacagagctatggacactgattcccactgttgtc
tctgctatcagtgtattaactccagcatttcagacactggatcgacaaacaaaaattgac
ccagatacaactgaagacccacctacggagaagatcaatggagaaattgagttcaaaaac
attcattttcattacccactacgaccagaagtgactatacttaacaactttagcttgcac
attgagtctggatcaaaggtagctcttgttgggccaagtggcgctggaaaatcttcagta
ttagctcttttgctgagattttacgttcctagggaaggttctatactcatcgacggaaag
aatattgagaagtacaatcttagaaagttaagaacacaaatagggttggtccaacaggag
ccgcttctcttcagttgttcaatcagagacaacatctgctatggaaacgaaggagcttct
gaaaccgaaatcatagaggtatcaaaaaattccaatattcatgaattcataagcaatttg
ccctatggttatgataccgtagttggagaaaaagggtgccagctttcgggtggacaaaaa
cagagaatagcaatagcaagaaccctacttaaaaagcctgcaataatgctgctcgacgag
gcaacaagtgccctcgatgcagagtcggaaagtgcagtagtaaatgctctggaatcaata
caactcaacagcagtggtgggtttttgaagaagactacacagattacagttgcacatagg
ctttccaccatcaaaaattcggacaccataattgttatggataaaggttcggttgtggag
atgggcacgcactcatccctgaaagatatatcggaaggagtttactcaagattctaccgt
ctccagagtgtgagacacaaacttcaccgcaaacagggtcagtcaacttga
DBGET
integrated database retrieval system
