Daucus carota (carrot): 108226348
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Entry
108226348 CDS
T05350
Name
(RefSeq) mechanosensitive ion channel protein 3, chloroplastic
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108226348
Transporters [BR:
dcr02000
]
Other transporters
Pores ion channels [TC:
1
]
108226348
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MSL2_3
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-GeneID:
108226348
NCBI-ProteinID:
XP_063935676
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Position
6:complement(38937328..38947205)
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AA seq
689 aa
AA seq
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MAASTSLLLLREVNARCTYNGRRHKSQYKGAIKKDPFHLFSITLSSHASLQDAWSIHLVN
SVQRHQSPVLSRYNVFFCRSTLTPSKGHEIPLVKTIAELTRSCNAFPQGSLVLQLIPAIG
VLAFAAWGLVPLVRLCLVLFQKKDITWKNSSAHYVLTSYVRPLLLWSGAALICRVLDPVI
LPSVASQAVKQRLLNFVQSLSAVLAFAYCFSSLIQQTQKFFTETKDFSDERDMGFEFAGK
AVYTAVWVAGVSLFMELLGFSTQKWLTAGGLGTVLITLAGREIFTNFLSSVMIHASRPFV
LNEWIQTKIGGYEVSGTVEHIGWWSPTIIRADDREAVHIPNHKFTVNVVRNLTQKTHWRV
KTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRIFLDNIDPENQALRIMVSCFV
KTSRFEEYMCVKEAILLDLLRVISHHHARLATPIRTVLKTYGEAEAERSPFSDLYTRPRA
AANPPFLLIEPSKINSDEKSKVSAQSDSNLDIKDGSGLNNLETDVKDASASPSSSNPHIK
VNEVAPSNSEILTATPVESLSDNSKKSIKYPGDVLSSTSGDHVSSGESSSVNTSSVSQEP
GRQNSPAKPLKPDVERSVSVLEDNILLGVALDGSKRTLPIDDEDISHSSITEEPSELATR
RKGNGTTTLSKGNKDDPTPSRTTDQLEKD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatccacttccctactactgttgcgggaagtaaatgctcgttgtacctataat
ggacgacgacataaaagccagtacaagggagcaattaagaaggatcctttccatttattc
agcatcactctttcctcccatgcttcgttacaagatgcttggagtattcatctagtgaac
tctgttcaacgacatcaaagtcctgtactttctagatataatgtcttcttttgccggtcc
actcttacaccatctaaaggacatgaaattcctcttgtgaaaacaattgccgagctgaca
aggtcatgcaatgcttttcctcaagggtctcttgtgcttcagttaataccagcaattggt
gttcttgcttttgctgcatggggacttgttccactggttagattatgcctagttcttttc
cagaaaaaagatattacttggaaaaatagtagcgcacactatgttttgacttcgtatgtt
cgacctttgcttctatggtctggtgcagcactcatttgcagagtattggatcctgtcatt
ctaccttcagtagcaagccaggccgtcaagcaaagacttctaaattttgtacaatcatta
tctgctgtgctggctttcgcctattgtttttcaagcttgattcaacaaacacagaagttt
ttcacggagacaaaagattttagtgatgaaagagatatgggttttgaatttgctggaaaa
gctgtttatactgctgtatgggttgctggcgtttcattgtttatggagttgctcgggttc
tctacacaaaaatggctcactgccggggggcttggcactgtgttgatcactcttgctgga
cgtgagatctttacaaattttctttcaagtgtaatgatccatgcatcaagaccatttgta
ctaaatgaatggattcagacaaaaattgggggctacgaagtttctggtacagttgagcat
ataggctggtggtcgccaacaattataagagctgatgatcgggaagcagttcacattcca
aaccataaattcactgtgaatgtcgtgaggaatcttactcaaaaaactcattggcgcgtc
aaaactcacctcgctattagtcacctggatgtcaacaagataaataacatagtagcagat
atgcgcaaggttttggctaaaaatccacaagtagagcagcaaaaattgcatcgacgaata
tttttagacaatattgatccagaaaatcaagcccttcgaattatggtgtcttgctttgta
aaaacctcacgctttgaagagtacatgtgtgtcaaggaagctatattgctagatctcctt
agagttatcagtcatcatcatgcccgccttgctacgcctattcgtacagtgctgaaaaca
tatggtgaggctgaagcagaacgttcaccattttctgacttgtacacacgtcccagagct
gctgcaaaccccccattcctgctaattgagccttctaaaatcaacagtgatgagaaaagt
aaggtttcagctcagtcagactcgaacctagacatcaaggacggatcaggtctaaataat
ttggaaacagatgttaaggatgcatcagcatctccctcttcttccaacccgcacataaag
gttaacgaagtagcaccatcaaatagtgagatcttaactgctacacctgtggaatccctg
tcggataattccaagaaaagtatcaaatatcctggtgatgtattgagtagtacttcagga
gaccatgtatcatcaggtgaatcatcttctgtaaacacttctagtgtttctcaagaacca
gggagacagaattctcctgcaaaacccctaaagccagatgtcgagaggtctgtttctgta
ttagaagacaacatactactcggtgtcgctttggatggctcaaaaaggacactcccaatt
gacgatgaagatatttctcactcttctataaccgaggaaccgagtgagctggctacacga
cgcaaagggaatggcactacaaccctgagcaaaggaaacaaagatgatccgacgccttcg
cgcaccacagatcagctggagaaagattga
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