Daucus carota (carrot): 108226555
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Entry
108226555 CDS
T05350
Name
(RefSeq) protein argonaute 16 isoform X2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108226555
03036 Chromosome and associated proteins [BR:
dcr03036
]
108226555
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108226555
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108226555
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108226555
microRNA pathway
RISC loading complex
108226555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Phage_holin_T
Motif
Other DBs
NCBI-GeneID:
108226555
NCBI-ProteinID:
XP_017257016
UniProt:
A0A164WA02
LinkDB
All DBs
Position
6:complement(29549045..29555664)
Genome browser
AA seq
900 aa
AA seq
DB search
MEKTGIQDLGGSPPLPPPPSHIPTGVDPERVEPPKLVMISRPDFGKSGRRIQLEANHFKV
SVKSPDEIFYQYSVSISYEDKKAVESKGIGRNIIDKLYQTYSSELAGKRFAYDGEKALYT
VGPLPRNKQEFTVVLEESIARREGSSGEPSKRSRQSFHSKSYIVEINYATKIPLRSVLLA
LNGDETDKVQDVLRVLDIILRQQAANRGCLLVRQSFFHDDSRALDDVGGGISRCFGLHSS
FRPTHGGLSLNIDVSTTMILTPGPVLEFLKVNQGTSDARALDWVKAKRMLKNMRIKAAHT
NKEFKIIGLSDKPCNELYFLMKGKYGDGTHGQEQPEEITVYEYFRRHRNLQLETSAYLPC
LDVGKPRRPNYLPLELCGLVSLQRYTKALSSMQRVALVEKSRVKPQERKKILTDSMGKYL
YDEDPLLSACGISIEKQLMKFDGRVLEAPKLKVGGDEDCIPQNGRWNFNRKRLMKPMKID
YWAVVNFSARDISQLLQGLINCGRNKGVVIERPNTLIEEKPQYRRASALVRVEKMFDQIM
SKFDRPPPYPFILCVLPERKNSAIYGPWKRKCLVEWGIPTQCVSPGNVNDQYLTNVLLKI
NSKLGGTNSLLALEVVSRVPIIRDSPTMIFGMDVSHGSPGQSDVPSIAAVVGSHSWPLIS
RYRAAVRTQSRKAEMIESLFKPLPNGKDDDGIMRELLREFYKTTSCRKPSQIVVFRDGVS
ESQFSQVLNIEIDQIIKTYQFLGEPNIPKFTVVVAQKNHHTKLFQAVGDHVNVPPGTVVD
TEIVHPRNYDFYMCAQAGKIGTSRPAHYHVLIDEIGFSADDMQNLVHSLSYVYQRSTTAI
SIVAPVYYAHLAATQAGKLIKSEESSDTSSGHGSHTSAANVPVPELPRLHDNVAGSMFFC
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacaggcattcaggatctaggtggatcacctcctttgcctccaccgccatca
catattccaactggagtggatcccgaacgagttgagcctccaaaacttgttatgattagt
aggccagattttggcaagagcggaaggcgcatacaattagaggcgaaccacttcaaagtt
tcagtgaaatctccagatgagatattttaccagtatagtgtttccattagttatgaggat
aagaaagctgttgagagtaaggggattggaagaaatataattgataagctctatcaaaca
tattcctcagaacttgctggcaagaggtttgcatatgatggagagaaagccttatatact
gtggggcccttaccccggaacaagcaggagttcacagttgttcttgaggagtccatagcc
agaagagaagggagctctggtgaacctagtaaaagatctaggcaatcttttcactcaaaa
tcatacatagtagagatcaactatgctaccaagataccgttgaggtctgttctgcttgcc
ctcaatggagatgagactgataaggttcaagatgtgctgagggtgcttgatattatttta
agacagcaagcggctaataggggttgccttttggtaaggcagtcatttttccatgatgat
tcaagggcgttggatgatgttggaggagggatatctaggtgctttggtcttcattctagt
tttcgtccaactcatggtggcttgtcactcaatatagatgtatcgacaaccatgatcctt
actcctggacctgtacttgagtttctgaaagtcaatcagggtacaagtgatgctcgtgct
ttagattgggtgaaggccaagagaatgctgaaaaacatgaggatcaaggccgcacatacc
aacaaggaattcaagataatagggttgagtgataagccttgcaatgagctatacttctta
atgaaagggaaatatggagatggtacccatggacaagaacaacctgaggagatcacagtt
tatgagtactttagaagacatcggaatttacagctagaaacttctgcgtaccttccgtgc
ctagatgtcggtaaaccaagaagacctaattatctcccactggagctttgtggccttgtc
tctcttcagcggtatacgaaagcactatcttctatgcaaagagtagctttagtggaaaaa
tccagggtgaagcctcaggagagaaaaaaaattctcactgattctatgggaaagtatctg
tatgatgaagatcctctcttatctgcttgtggcatttctattgagaaacagcttatgaag
tttgacggtcgtgttcttgaagcaccaaagttaaaggtcggtggtgatgaagattgcatt
ccccagaatggtagatggaattttaatagaaagagacttatgaaaccaatgaaaatagat
tattgggcagtagtgaacttctctgctcgtgatataagtcagctattacaagggctgatt
aattgtggaaggaacaaaggggttgttattgaacgtccaaatacacttattgaggaaaag
ccccaatatagaagagctagcgcactggtaagagtggagaagatgtttgatcagatcatg
tcaaagttcgatcgacctcccccgtaccctttcatcttgtgtgtcttaccagagagaaag
aattctgctatctatggaccatggaagaggaaatgtttggttgaatggggaatccccaca
caatgtgtttctcctgggaatgttaatgaccagtatcttacaaatgttcttttgaaaata
aattcaaagcttgggggtactaattctttgctagcactggaggttgtttctcgtgtacct
ataataagagactctccaactatgatatttggcatggatgtttctcatggctctcctggc
caatcagatgtcccatccatagcagcggttgttggatctcattcctggccattgatatca
aggtatagagcagctgttagaacacaatcccgtaaagctgagatgattgagtctttgttc
aaacctttgccaaatggaaaagatgatgatggcataatgagggaactgcttcgggaattc
tataaaacaaccagttgtcgcaaaccatctcagatcgtcgtattcagggacggggtcagt
gaatcacagtttagccaagttttgaacattgagattgatcagataataaagacttatcag
tttcttggcgagccgaatataccgaagttcacagtggtagttgcccaaaaaaatcatcat
actaaactctttcaagcagtcggtgaccatgtgaatgttcctcctgggactgttgtggac
acggaaattgtgcacccaagaaattatgatttttacatgtgtgctcaggcagggaagatt
ggaacttctcgtcctgctcactatcatgttttaattgatgaaattggtttctcagctgat
gatatgcaaaatctcgtccattccctatcatatgtgtaccaaagaagtactaccgcaatc
tccatagttgcacccgtctactatgcccaccttgcggctacacaagcgggcaagttgata
aagtctgaggaaagcagcgatacttcttcaggacatggaagccacacatctgccgcgaat
gtccctgttcctgagctgcccaggctgcatgataatgttgcagggtctatgtttttctgc
tga
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