Daucus carota (carrot): 108227129
Help
Entry
108227129 CDS
T05350
Name
(RefSeq) dynamin-2A
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04144
Endocytosis
dcr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108227129
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108227129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108227129
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108227129
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
108227129
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
108227129
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
108227129
RhoA-dependent endocytosis
108227129
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108227129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_8
MMR_HSR1
PH_11
GTP_EFTU
AIG1
RsgA_GTPase
TetR_C_46
AAA_16
PH_20
KH_TffA
Motif
Other DBs
NCBI-GeneID:
108227129
NCBI-ProteinID:
XP_017257616
LinkDB
All DBs
Position
6:complement(19342483..19356773)
Genome browser
AA seq
917 aa
AA seq
DB search
MEAIDELSQLSDSMRQAAAVLADEDVDESSRSSRRSSTFMNVVALGNTGAGKSAVLNSLI
GHPALPTGEGGATRAPICIDLKRDDSLSSKSIVLQIDSKSQPVSASALRHSLQDRLSKNS
SKNDEIYLKLRTSTAPPLKLIDLPGVEKGDSVSKYAEHSDAILLVIIPASQAPDVSSAKA
LRIAKEYDGDSTRTIGVISKIDQASSEPKVLAAVQALLLNQGPRSTSDIPWVALIGQSVS
IASAQSGTVGSDNSLETAWRAESESLKSILVGAPQSKLGRLALVETLAQQIRKRMSIRLP
NLLSGLQGKSQVVKDELVKLGEQMVSSSEGTKALALELCREFEDRFLQHITTGEGSGWKV
VASFEGNFPNRIKQLPLDRHFDMNNVKRVVLEADGYQPYLISPEKGLRSLIKGVLEMAKE
PSRLCVDEVHRVLVDIVSASANATPGLGRYPPFKREVVAIATTALEGFKTEAKNMVVALV
DMERAFVPPQHFIRLVQRRMDRQRREDELKNRGSKRAVDAEQSSSNRATSPQTGGQQQSG
GALKSLKDKLSRSEKDSPETPALKTAGSEGEITAGFLLKKSTKTDGWSRKWFVLNEKTGK
LGYTKKQEERHFRGVITLEDCVIEDASEEEEPPSKEPPSKSSKDKKANGPDAGKPNLVFK
ITNKVAYKTVLKAHSAVLLKAESMADKVEWLNKLRKVIGVKGGQAKGENGTPMRQSLSDG
SLDTMARRPADPEEELRWMAQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNKLYS
SVSSQSTARIEELLMEDQNVKHRRERYQKQSSLLSKLTRQLSIHDNRAAAASSLSGDTPE
SSPRTNGPSAGDDWRSAFDAAANGRSDSFGNSSRTGSNGHSRDPAENGDADSGSNPGGRR
TPNRLPPVPPSGSGYRF
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatcgatgagttatctcagctctccgattcgatgcggcaagctgctgcggtg
ctggcggatgaggatgtggatgagagttctagatcgtcgaggcggagttcgacgtttatg
aatgtcgttgcgcttggaaatactggtgcgggtaaatcagccgttttgaacagtctaatc
ggacatcctgctttgccaactggtgaaggtggtgcaacacgtgctccaatatgcatcgat
ttaaaaagagatgattctttaagcagcaaatcaattgttttgcagatcgatagtaaatct
caaccagtttctgcaagtgcactacgacattctttacaggataggctcagcaaaaactca
agtaagaatgatgagatatatctgaagcttcgaacaagtacagctcctccgttgaaactg
attgatttgcctggagtagaaaaaggtgattcagtgagcaaatatgccgagcacagtgat
gcaatattattagttattatacctgcttcacaagcaccagatgtttcctctgcaaaagcc
ctgagaattgcaaaagaatacgatggagatagtacaagaaccattggcgtgattagtaag
atagatcaagcatcttcagaaccaaaggttcttgcagctgttcaggctctgcttttgaac
cagggaccacgcagtacttccgacataccttgggttgcgctgattggtcagtctgtttct
atagcgtctgcacagtccggaactgttggatctgataattcactagaaactgcttggcgt
gctgagagtgaaagtcttaagtcgattttagtgggagctcctcaaagtaagcttggtaga
ctagcactagtggaaacccttgctcaacaaatccggaagcgtatgagcatcaggctccca
aaccttctatctgggctgcagggtaagtctcaagtagtgaaagatgaattagtaaagctt
ggtgaacaaatggttagtagctctgaaggcacaaaggccttggcgttggagctttgccgt
gaattcgaggatagatttctacaacatattacaaccggtgagggtagtggatggaaggtg
gttgctagttttgaggggaactttcctaatagaattaaacagctccctctagacagacat
tttgacatgaacaacgtcaagagggttgttttagaagcagatggttatcaaccttatctg
atatctcctgagaaaggtctaagatctttgataaagggtgttttagaaatggctaaagaa
ccatcccgcctttgtgttgatgaggtgcatcgggtactcgtggatatagtctcagcttct
gcaaatgctaccccagggctaggaagatatcctccttttaagagagaggttgtggcaatt
gcaactactgctctggaagggtttaaaactgaagcaaaaaacatggttgtggcacttgtt
gatatggaacgtgcatttgtccctccacaacacttcatccgtctggtgcagaggaggatg
gacaggcagaggcgggaagatgagctgaaaaaccgcggttcaaaaagggcagttgacgcg
gagcagtctagttcgaatagggcaactagtcctcaaacaggaggccaacaacaaagcggc
ggagcattgaaatcattgaaggacaagttgagtcgttcagaaaaggattcaccagagaca
ccagccttgaagaccgcaggttcagaaggggagataacagcaggatttctgctgaagaaa
agcacaaagacggatggatggagtagaaaatggttcgttttaaacgagaaaactggaaag
cttggatacaccaagaaacaggaggagcgtcacttccgtggagtcattactttggaggat
tgtgttattgaagatgcttccgaggaagaagaacccccatcaaaagaacccccatcaaaa
agttccaaggataaaaaagcaaatggtccagatgctggaaaaccaaatcttgttttcaag
ataactaacaaggttgcatataagacggtgttgaaagctcatagtgctgttctgttaaag
gctgagagcatggcagacaaagttgagtggttgaacaagttaagaaaagtgattggagtt
aaaggaggccaagcgaagggtgaaaatggtactcctatgagacaaagtctctctgatggt
tctcttgacacaatggccagaagacctgcagacccggaagaggaactcagatggatggcc
caagaagtacgaggttatgttgaagctgtactgaacagcctggctgctaatgtcccaaaa
gctgttgttctttgccaagtagagaaagctaaggaagacatgcttaacaagttgtacagt
tctgtaagctcccaaagtacagcaaggattgaagagctgctcatggaggaccagaatgta
aagcacagaagggagcgttatcagaaacaatcctccctgctttcaaaacttacgaggcaa
cttagtatccatgacaaccgagcagccgctgcctccagtttgtctggcgatacccctgaa
agtagcccaaggaccaatgggccttcagcaggtgatgattggagatctgcttttgatgct
gctgctaatggtcgttcagattcatttggtaattcttcaagaacaggttccaatggtcat
agtcgtgatcctgcagaaaatggtgatgcagactcaggttcaaaccctggtggccggcgc
acccctaatcgattaccacctgtgcctccgtctggctctggatataggttttaa
DBGET
integrated database retrieval system
