Daucus carota (carrot): 108227130
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Entry
108227130 CDS
T05350
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108227130
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108227130
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108227130
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108227130
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108227130
Ion channels [BR:
dcr04040
]
Chloride channels
Chloride channel (CLC)
108227130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
HSD_C
Motif
Other DBs
NCBI-GeneID:
108227130
NCBI-ProteinID:
XP_017257617
UniProt:
A0AAF1B2S7
LinkDB
All DBs
Position
6:complement(19358808..19366926)
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AA seq
786 aa
AA seq
DB search
MEDEDAKNDTSPPQLDIENEGSLFDRRDFRNVNDDVSGMNSGRSLHEPLLLKNRKNTTSQ
IAIVGANVSPIESLDYEIIENDLFKQDWRSRKKIQIFQYVVLKWTLACLIGISTGFVAFC
NNLGVENLAGFKLLLTNDLMLKERYYLAFVAYAGCNVFLAICAGVLCAYIAPAAAGSGIP
EVKAYLNGVDAHSILAPSTLFVKIFGSIFGVAAGFVCGKEGPMVHTGACIANLLGQGGSR
KYHLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRT
FFTTAVVAMVLRSLISFCKSGKCGLFGEGGLIMFDMDSAVTNYTVPDLLAVIVLGVVGGI
FGSFYNYLVDKVLRTYSIINERGPAYKLLLVITVSLLTSCCSYGLPWFTECTPCPPGLEA
QCPTIGRSGNYKNFQCQPDHYNDLASLFLNPNDDAIRNLFNSSNPREFRLSSLLIFFSAM
FLLGIVTYGIAVPAGLFIPVILAGASYGRVAGTLFGHISNLNVGLFALLGAASFLGGTMR
MTVSLCVILLELTNNLLMLPLVMLVLLVSKTVADSFNKGVYDQIVMMKGLPYLEAHAEPY
MRNLVAGDVVSGPLIEFSAVERVGNIYHSLKMTKHHGFPVIDEPPFASAPELCGLVLRSH
LLVLLHGKRFTKQRELSGKELLSKFQASDFAKAGSGKGLKLKDLDLTEEEMEMFVDLHPI
TNTSPYTVVETMSLAKAAVLFREVGLRHLCVVPKSPGRPPIVGILTRHDFMPEHILGLYP
HINPHK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaagatgctaaaaatgacacttctcctcctcagctcgacatagagaacgaa
ggctcgttgttcgatcgccgagattttcggaacgtcaacgacgacgtgtccggcatgaac
tccggccgctctcttcatgaaccgctgctgctgaagaaccgcaagaatacgacgtcgcag
attgcgattgttggcgccaatgtttcgccgatcgagagccttgattatgagattattgaa
aatgatctatttaagcaggattggagatcaaggaaaaagattcagatttttcagtatgtt
gtactcaagtggacactggcatgccttatcggaataagtacaggatttgttgctttctgc
aataacttaggagtggaaaatcttgccggtttcaagcttctactcactaatgatcttatg
cttaaagaaaggtattatctggcttttgtagcatatgctggttgcaacgtgtttttagca
atttgtgctggagtcctgtgtgcttacattgcccctgcagcagcaggctctggcatacct
gaggttaaagcatatcttaatggtgtagatgctcattcaatcttggctccaagtactctc
tttgtcaagattttcggctctatctttggtgttgctgctggatttgtttgtggtaaagaa
ggacccatggtacacactggagcttgcatagccaacttgcttggacagggaggttcacgc
aagtaccatttgacttggaaatggctcaggtttttcaaaaatgacagggaccgtagagat
ttgatcacttgtggagcagctgctggtgtggcggctgcctttcgtgctccagttggcgga
gttctctttgctcttgaagaagcagcctcatggtggcggagtgctcttctgtggagaacc
tttttcacaactgctgtagtggctatggtactgagatctctcatatcattttgtaagagt
ggcaaatgcgggctatttggagaaggtggtctcatcatgttcgatatggattccgcagta
actaattatactgtgccagatcttctggcagttatagtacttggagttgttggtggtatc
tttggaagtttttacaactatctcgtcgacaaggtccttcgaacttatagcatcattaat
gagagaggtccagcttataagcttttgctcgtcattaccgtctctcttctcacatcttgt
tgctcatacggtcttccgtggttcacagaatgcactccctgtccaccaggtctggaagct
caatgcccaaccataggccgttcgggaaactataagaactttcaatgtcaaccagaccat
tataacgacctggcctccctattccttaatcccaatgatgatgctattcgcaacttattt
aactctagcaatcctagagagtttcgcctttcttcccttcttatattcttttctgctatg
ttcttacttggtatagttacttatggtattgccgttcctgccgggctctttatacctgtc
atacttgctggagcatcttacggacgggttgcaggaaccctctttggccatatctccaac
ctcaatgtagggctctttgctctgcttggggctgcctctttccttggtggcacaatgaga
atgacagtatcactttgtgtcattcttctcgagctcaccaataatctcttgatgcttcca
cttgtgatgcttgtgctccttgtttctaaaactgttgctgatagtttcaataagggtgtt
tatgaccaaatagtgatgatgaagggtctgccttatttggaagctcatgctgaaccctac
atgagaaacttggtagcaggggatgttgtttctggacctttaatagagtttagtgctgta
gagagagttggtaacatatatcattctttgaagatgacaaaacatcatgggtttccagtt
attgacgagcctccttttgcaagtgccccagaattgtgcggacttgttttgaggtctcac
ttgctcgttttgctccacggaaagaggtttaccaagcaaagggagttgtctggaaaagaa
ttattaagtaagtttcaggcctctgattttgcgaaggccggatcagggaaggggctcaaa
ctaaaagatttggatctcaccgaagaagaaatggaaatgttcgtcgatcttcaccctatc
accaatacatctccatacacagttgtagagacaatgtcgttggccaaagctgcagtcttg
tttagagaggttggccttaggcacctgtgtgtggtgccaaagtcaccagggaggccgcct
attgttggtatcctgacgaggcacgacttcatgccagagcacatattggggctctaccca
catatcaatccccacaagtaa
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