Daucus carota (carrot): 108227181
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Entry
108227181 CDS
T05350
Name
(RefSeq) chloride channel protein CLC-b
KO
K05016
chloride channel 7
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108227181
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108227181
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108227181
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108227181
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108227181
Ion channels [BR:
dcr04040
]
Chloride channels
Chloride channel (CLC)
108227181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF7321
Motif
Other DBs
NCBI-GeneID:
108227181
NCBI-ProteinID:
XP_017257696
UniProt:
A0AAF0XDI2
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All DBs
Position
6:23908244..23913594
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AA seq
787 aa
AA seq
DB search
MVEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIE
SLDYEINENDLFKQDWRSRSKVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYK
LLVVANYIEKESYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTP
NMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYF
NNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR
LSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKI
LRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEACPTTGRVGNFK
QFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAV
PSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLEL
TNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADV
KPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLL
LKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYT
VVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKA
KGSKKGQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagagcaatcccagcatgcagaaccagcaaggaattacatggaaggacagcaa
gcagatgaagagcagggaaatccagagaacaactctttgcaccggccactgcttaaaaga
aatctgactctttcttctagtccactagcgctggtgggcgccaaggtttctcatatcgaa
agcttagattatgagataaatgaaaatgatctctttaagcaagactggagaagcagatcc
aaggtacaagtgctgcagtacatatttttaaaatggaccctggccttcctagttggcctt
ttaacaggtgtcattgccaccctcattaaccttgcaattgagaacatcgcaggctacaag
cttcttgttgtggctaactacattgagaaggaaagttaccttgcaggattcatctacttc
acaacagctaattttcttttgacactggtcgcttctgctctctgtgtgtgctttgcaccc
accgcagctggccctggtattcctgaaattaaagcttatctcaatggggtagacacacca
aacatgtttggtgctacaacactaatggtgaagatagttggaagcattggagctgtctct
gcaggcttagatttaggaaaagaagggccattggtccacattggtgcttgccttgcttcc
ttactaggccaaggtgggcctgacaattaccgtctcagatggcgctggctccggtacttc
aacaatgatcgtgaccgcagagatctaataacatgtggttcctcttctggagtatgtgct
gcttttcgctccccagtgggtggtgtccttttcgctcttgaagaggtggcaacatggtgg
aggagtgctctactttggaggaccttcttcagtacagcagtggtggtggtggtattgaga
ctttccatggaatactgtaaaaatgcaagctgtggcctatttgggcagggaggactaatt
ctgtttgatgtgagtgacgtcagcttgaggtaccatgtcgtggacatcatcccagtcact
gtactcggagtaattggaggagtactgggaagcctctacaactacctactacacaaaatc
ctcagggtttacaacctcatcaatgagaagggaaaattacacaagcttctactcagtctc
actgtatcattgtttacttcagcatgtctgtacggacttcctttccttgccagctgcaca
ccttgtgatccctcccttcaggaagcatgtccaacaacaggacgtgtagggaacttcaag
caatttaactgcccaagtggccactacaatgacttggccaccctcctacatacaaccaat
gatgatgctgtccgacacattttttccaccaacactcctacagagttccagtatttctcc
ctcaccatcttctttgcattatattgcatcttgggactctttacctttggtattgcagtc
ccgtcaggtctttttcttccaatcatcctaatgggatcagcttatggtcgcatgcttggg
atagctatgggagattacacaaaaattgaccagggactgtatgctgtactaggagcggcc
tccctcatggctgggtcaatgaggatgacagtttccctttgtgtgatatttcttgaactg
accaataaccttctcctgctaccaattacaatgttggttcttctaatttccaaaactgtt
ggagactgctttaatccaagtatctatgagattatactggatctaaaaggattgcctttc
ttggatgcacatcctgaaccatggatgagaaatattacagttggtgagctagctgatgtc
aaaccaccagttgtaacccttcgtggaatcgagaaggtaggccgcatagtagatgttctt
cggaacaccacccacaatgggttccctgttgtagatgacagggaggtgccagtaggcagt
caggcactcggagaacgggaactgcatggactagttttaagagctcaccttgttttacta
ctgaagaagaaatggttcctgcaagagagaaggagaacagaagaatgggaagtgagagaa
aaaattacctcagttgatttggctgaaaggagtgtgaagcttgaagaggtagctgtgacg
aagaatgagatggagatgtatgttgatttacatcctctcaccaatacaacagcttacacg
gtagtggagaccatgtctgttgcaaaggctcttgtgctgttcagggaggtgggtctccgc
catatgctcatcctgcccaagtttcaaggatctggggtgtctccggtggtggggatcttg
accaggcaggacctgagggcccataacattttaagtgctttccctcatcttgagaaagcc
aagggaagtaaaaaggggcaataa
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