Daucus carota (carrot): 108227231
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Entry
108227231 CDS
T05350
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108227231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108227231
03036 Chromosome and associated proteins [BR:
dcr03036
]
108227231
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
108227231
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108227231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
108227231
NCBI-ProteinID:
XP_017257764
LinkDB
All DBs
Position
6:28051510..28057733
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AA seq
337 aa
AA seq
DB search
MISGSNREGASKSWGTNGSGQSVSTSGSVGSPTTRSEAVVNTPPSDKTLIRLNHIDAHAD
DVASQATDINKKKKRGQRAVGGDKNGRGLRQFSMKVCEKVQSKGRTTYNEVADELVAEFS
DPGNGISSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWRGLPRTSMNDIEELK
CELLGLRSRVEKKAAYLQELEEQYVGLQNLIQRNEQLYSSGDTPSGGVALPFILVQTRPH
ATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKVCERQQGNEPQIPSDGGESSSVPV
FQPQIAQPSSLGVQSSRPPTSPPLPGILKAARVKNAH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtgggagtaatagagaaggagcaagcaagtcatggggcaccaatggctccggc
caatcggtgtcgactagcggcagcgttggctctcctacaacccggagtgaggcggttgtc
aacactccccccagtgataagactttaattaggcttaatcatattgatgctcatgctgat
gatgttgcatctcaagctactgatattaataaaaagaaaaaaagaggtcaacgagcagtt
ggaggggataagaatggcaggggactccgccaatttagcatgaaagtttgtgagaaagtg
caaagcaagggaagaactacttataacgaggtcgcagatgaacttgtggctgaattttct
gatcctggcaatggaatttcatccccagaccagcaacaatatgatgagaaaaacatccgt
cgaagggtatatgatgctcttaatgttctcatggctatggatatcatatccaaggataaa
aaagaaatacagtggaggggtctgcctcggactagcatgaacgacattgaggaattaaag
tgtgagcttcttggactgcgaagtagggttgaaaagaaagcagcatatctgcaagaactg
gaggagcaatatgtaggtctgcagaaccttatacaacggaatgagcaattatacagctct
ggggatactcctagcggtggcgtggccttacctttcatattagtgcagactcgtcctcac
gcaactgttgaagtggagatatcagaagatatgcaactggtgcattttgactttaatagc
accccttttgagcttcatgatgacaattatgttctcaaggctatgaaagtatgtgaaaga
caacagggtaatgagccacaaattccctcagatggaggagaaagctccagtgttccggtg
ttccaacctcaaattgctcagccttccagtttgggcgtacaatctagtagacctcctact
tcacctcctcttcctggaattttaaaggctgcccgagtaaagaatgcgcactag
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