Daucus carota (carrot): 108227257
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Entry
108227257 CDS
T05350
Name
(RefSeq) chaperone protein ClpB4, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108227257
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP100
108227257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
AAA_18
IstB_IS21
TniB
Zeta_toxin
AAA_28
AAA_7
Torsin
NBD_SMAX1
NACHT
Motif
Other DBs
NCBI-GeneID:
108227257
NCBI-ProteinID:
XP_017257802
UniProt:
A0A164V449
LinkDB
All DBs
Position
6:complement(7619945..7628978)
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AA seq
987 aa
AA seq
DB search
MAASRRSSLSLARAFTRPLLTNPTNYHTPHRLLCLLSSSSTNIFPFQHNPQAHFLTSCLN
STRTHSLANTKTLRPGLFYSFSSPPSYSTNASSSAQINDSEFTEMAWEGIVGAVDAARIS
KQQVVQSEHLMKALLEQKDGLARRILTKAGLDNTSVLQATDDFIHKQPKVIGETSGPVLG
PDLNVLLSNARNHKREMKDDFVSVEHLLLAFLSDKRFGQQLFKNLQLSEQTLKDAVKAVR
GNQRVTDQNPEGKYDVLDKYGNDLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVI
IGEPGVGKTAIAEGLAQRIFRGDVPEPLMNRKLFSLDMGSLLAGAKYRGEFEERLKAVLK
EVTASNGQIILFIDEIHTVVGAGAAGGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIE
KDPALERRFQQVFCDQPSVEDTISILRGLRERYELHHGVKISDSALVSAAVLADRYITER
FLPDKAIDLVDEAAAKLKMEITSKPTELDEIDRAILKLEMEKLSLKNDTDKASKERLAKL
ENDLVSLKEKQKGLTEQWDREKNLMTRIRSTKEEIDRVKLEMEAAERDYDLNRAAELKYG
TLMSLQRQLEEAEKNLADYQGSGNSLLREEVSDLDIAEIVSKWTGIPLSNLQQSERDKLV
LLEEVLHKRVVGQDMAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELGKALAG
YLFNTENALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIE
KAHHDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILDTLRKTHDNTDAVY
NLMKREVVELARQTFRPEFMNRIDEYIVFQPLDSKEISKIVEIQLNRVKDRLKQKKINLQ
YTKEAIEHLGQVGFDPNFGARPVKRVIQQMVENEVALRFLKGDIKEEDTLLIDADMSSKN
EDVAGQNRLVIKKLESSWAEDALVANN
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagcagaagaagctctctctctttggcaagagccttcacaaggcctcttctt
acaaaccctactaattatcacactcctcacagattattatgcctcctctcttcttcttct
accaatattttcccttttcaacacaacccacaagctcattttcttacttcttgtttgaat
tctactagaactcactctcttgctaatactaaaactttaaggcctggtttgttttatagc
ttctcttctcctccttcttactccaccaatgcctcttcctctgctcagattaatgattca
gaatttactgagatggcatgggaggggattgttggtgctgtcgacgcggcgcgaatcagc
aaacaacaggttgtgcaatctgagcatttaatgaaagcactgctagagcagaaagatggt
ctggctagaagaattttgacaaaggctggccttgataacacttcagttctgcaagctact
gatgacttcatacataaacaaccaaaggtgataggtgaaacaagtggcccagtacttggt
ccagatctcaatgttctgttgagcaatgcaaggaatcataaaagagagatgaaagatgac
tttgtgtcggttgaacatctattattggccttcctctcagataagaggtttggtcagcag
ttgttcaagaatttgcagctcagcgaacagactttgaaagatgccgtcaaagctgttcgc
gggaatcagagggtcaccgatcaaaatccggaaggaaaatacgatgtactggacaaatat
ggaaatgatctaacagagcttgctcgacgtggtaaacttgatcctgttataggcagggat
gatgaaatcagacgatgcattcagatactatctcggagaacaaaaaataacccagttatc
attggcgagccaggtgttggaaaaactgcaatagctgaagggttagctcaaaggattttt
cgtggggatgttcctgaacctctgatgaaccggaagttgttctccttggatatgggttca
ctgcttgctggtgccaagtacagaggagagtttgaggaaaggctcaaagctgtcctaaaa
gaagtcacagcttcgaatggtcagattattttgtttattgatgagatacacactgtggtt
ggtgcaggtgccgctgggggagcaatggatgctggaaatctgttgaagccaatgctgggt
cgtggtgagctgcgatgtattggagcaaccacattaaacgagtacaggaagtacattgag
aaagaccctgctttagaacggagatttcaacaggtattttgtgaccagccatctgtagag
gacacaatctctattctccgaggattgcgtgagcggtatgaactgcatcatggggtcaaa
atatctgacagtgccttggtttcggcggctgttctagcagatcggtacatcacagagcgg
tttttaccagataaagctattgatcttgttgatgaagctgctgcaaaacttaaaatggag
atcacttctaagcccactgaattggatgaaatcgacagggcaatactgaagttggagatg
gagaagctctctctgaaaaatgacactgataaagcatcaaaagaacggctggccaaattg
gaaaatgatcttgtatcactcaaagaaaaacagaaagggctaactgaacagtgggatcgt
gaaaagaatcttatgacccgaataagatccacaaaggaggagattgacagagtcaaatta
gagatggaagctgctgagcgtgactatgacctaaatcgtgctgctgagcttaaatatgga
acattaatgtctcttcaacgccagcttgaagaagctgaaaagaatcttgctgactatcag
ggttctggcaattccttgctgcgtgaagaagtctctgatcttgatattgctgaaatcgta
agtaagtggactggcattccattgtcaaaccttcagcaatcagagagggacaaacttgta
ttgctggaagaggttcttcacaagcgcgttgtcggtcaggatatggcagtcaaatcagta
gctgatgctatcaggcggtctagggccggactttctgaccctaacagacctatagcaagc
tttatgtttatgggaccgactggtgttggcaagactgaacttgggaaagcactggccgga
tacctttttaacacagaaaatgctcttgtgcgcattgatatgagtgagtacatggaaaaa
catgcagtttctcgcttagttggtgccccacctggttatgtaggttatgaagaaggtggg
cagctgactgaagtggttcgtcggaggccttattctgttgtgctttttgatgaaattgag
aaggcgcatcatgatgtcttcaacattctattacagctgttggatgatggaaggataacc
gactcccaagggagaactgtcagtttcaccaactgtgtggtgataatgacatcaaatatt
gggtcgcattacattcttgatactctccggaaaacacatgataatacggatgctgtatac
aatttgatgaaaagagaggtcgttgagttggctagacaaactttccgtccagaatttatg
aacagaatcgatgagtatatcgttttccaaccacttgactcgaaggaaataagcaaaatt
gtggagattcagctgaatcgtgtcaaggacaggctaaagcagaagaagatcaatcttcaa
tacacaaaggaagcaatcgaacacctggggcaagtaggttttgaccctaattttggcgct
aggccagtgaagagagtgatacaacaaatggtagagaatgaggttgctttgagattcttg
aaaggagatatcaaggaagaagacacgcttttgatcgatgctgacatgtcttcaaagaac
gaagatgttgcaggtcagaatagattagtgatcaagaaactcgagagtagttgggccgag
gacgcgttggtggcaaacaactaa
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