Daucus carota (carrot): 108227283
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Entry
108227283 CDS
T05350
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108227283
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108227283
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108227283
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108227283
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108227283
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108227283
Prokaryotic type
108227283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DASH_Duo1
Motif
Other DBs
NCBI-GeneID:
108227283
NCBI-ProteinID:
XP_017257834
LinkDB
All DBs
Position
6:complement(37308701..37325529)
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AA seq
1068 aa
AA seq
DB search
MTDPEKKEKTDMQPTVSTVEDPEKKKKKEEKAKEKELKKLKAAQKAEAAKMKAQQGTKGS
KKKNTKREAAEENATDYIDPHTPSGEKKQLSSQMAKQYNPVAVENSWYQWWEKSNFFVAD
SSSSKPPFVIVLPPPNVTGALHIGHALTAAIQDTIIRWRRMSGYNTLWVPGMDHAGIATQ
VVVEKKIMREKQLTRHDLGRENFVSEVWNWKNQHGGTILKQLRRLGASLDWSRECFTMDE
KRSRAVTEAFVRLHEEGLIYRDLRLVNWDCVLRTAISDIEVEYLDIKERTLLKVPGYKKL
VEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAVHPEDPRYKHLHGKFAIHPFNDR
KLRIVCDAILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGMINSNGGSAFI
GMPRFEAREALTKALEEKGLYRGAKNNEMRLGICSRTNDIIEPLIKPQWYVNCKDMAKEA
LDAVMCEERKIEIIPCQYAAEWRRWLENIRDWCISRQLWWGHRIPAWYASLEDDQLTEVG
AYSDHWVVARNEEEAHIRAKQLFAGKKFQLSQDPDVLDTWFSSGLFPLSVLGWPDETEDF
RAFYPTAVLETGHDILFFWVARMVMLGSKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNV
IDPLEVITGISLDGLHKRLEEGNLDLSELQVAKEGQRKDFPDGIPECGADALRFALVSYT
AQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSKLGDDYIPPSNFVYEGLPFSCQWILSVL
NKAIAKTVKSLDSYEFSDAATAVFSWWQFQLCDIFIEVIKPYFYSNDPTLISARTSAQDT
LWLCLDNGLRLLHPFMPFVTEELWQRLPSPRDSARKESIMICEYPTVIEHWTNEKVENEM
NLVESVVKSYRSLRAELPANERNERRSAFAHCQTDEVAETIKVHESEISTLAALSSLQVL
RQNDDPPAGCSVSIVNENLSVYLKLQGNINVEAELEKLKKKMEEIQKQCDNLNKMMGASG
YQQNAPRHVREEDQARLEMLMQQLSLCEDATQRLGKATDASENGGNGN
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcccgagaagaaggaaaaaacggacatgcagccaactgtatcgacagtagaa
gaccctgagaagaagaaaaagaaagaagagaaggctaaagaaaaagaactgaagaaacta
aaggccgcacaaaaagctgaagcagcaaaaatgaaggctcaacaaggtaccaaaggtagt
aaaaagaagaacacaaaaagggaggcagcagaagaaaatgccacagactatattgaccca
catactccttccggtgagaagaaacaactctcttcgcaaatggcaaagcagtataatcct
gttgctgtagagaattcgtggtatcaatggtgggaaaaatcaaacttttttgtggcagat
tctagcagttccaagcctccattcgtgattgttctaccacctcctaatgtaactggggcg
ctgcatataggtcatgcactcaccgctgccatccaggatacaataatacgctggcggaga
atgtcaggatacaataccttgtgggtgccagggatggatcatgctggtatagcaacacag
gtggttgtggaaaagaagatcatgagggaaaaacaattaactcgacatgatttggggcgg
gaaaactttgtatcggaagtatggaattggaaaaaccagcacgggggaactatcttgaaa
caattacgccgcctcggtgcttctcttgactggtctcgtgagtgctttacaatggatgag
aaaaggtcaagggctgtgacagaagcttttgttaggcttcatgaggaaggtcttatttat
agggatctgcgactagtaaattgggattgtgtcctgcgaacagcaatttccgatattgag
gtagagtatcttgatatcaaagagcgcacattgttaaaggtccctggatataaaaaactc
gtggagtttggtgttttgacatcatttgcctatcctctggaaggaggtcttggtgagatt
gttgtggccactactagagttgaaacaatgctaggtgatactgctatagctgtacatcct
gaagacccacggtacaagcatcttcatgggaaatttgccattcatccgttcaatgacaga
aaacttcgtatagtatgtgatgctatacttgttgatccgaagtttggaactggtgctgtt
aagataactcctgcacacgatccaaatgattttgaggttgggaagcgacataatcttgag
ttcattaacatattcactgatgatggtatgatcaatagcaatggtggctcagcctttata
gggatgccgcgctttgaagctcgtgaggcactgactaaagctttagaagagaagggactt
tatagaggtgctaagaataatgagatgcgtctcggtatttgttcgagaacaaacgatatc
atagagcctttgataaagccgcagtggtatgtcaactgcaaagatatggccaaggaagct
ttggacgctgttatgtgcgaggaaaggaaaattgagatcattccatgtcagtatgctgca
gaatggagaagatggcttgagaacattcgtgattggtgcatttcaaggcagctttggtgg
ggtcatcgtattcctgcatggtatgcttccctggaggatgatcaactgacagaagttgga
gcatactctgatcattgggtggtggccagaaatgaagaagaagctcatatacgggcaaag
cagttatttgctgggaaaaagtttcagttgtctcaagaccctgatgttctagatacctgg
ttttcttcgggcctattccctttatctgtattagggtggccagatgagactgaagatttt
agggctttttatcctactgctgtcctcgaaaccggacacgacatactatttttctgggtt
gctcgtatggtgatgttaggaagtaaattaggaggtgatgtacctttccgaaaggtttat
ttgcatccgatgattcgtgatgcacatggccgtaagatgtccaaatcacttggaaatgtt
attgatccccttgaagtaattactggaatatccttggacgggcttcacaagagacttgaa
gagggtaatttggatctctcagaactgcaagttgccaaagagggacaacggaaggacttc
cctgatggtattccagaatgtggagcggatgccctacgctttgcccttgtgtcttacaca
gcccagtctgataagattaacttggacatacaaagagttgttgggtatcgccaatggtgc
aacaagttgtggaatgctgtgaggtttgcaatgagtaagcttggagatgattatatccct
ccctcgaactttgtgtatgaaggcttgccatttagctgccaatggatactatcagtgttg
aataaagccattgccaagactgtaaaatctctcgattcatacgagttttctgatgcagcc
actgcagtgttttcgtggtggcagttccagctgtgtgatatttttattgaagttataaaa
ccctatttttatagtaatgatccaacgttaatatcggcgaggacgtctgcacaagacacc
ttgtggttgtgtctagataatggtttgcgtttgctccatccatttatgccttttgtcact
gaagaattatggcagagacttccttcacccagggactctgcaaggaaagaatcaatcatg
atatgtgaatatccaacagtcatagagcactggacaaatgagaaagtggaaaatgagatg
aatttggttgaatcagttgtgaaatcatataggtcactcagggcagaattgcctgcaaat
gaaagaaatgaaaggcgatcagcttttgcccattgccaaacagatgaagttgcggagacg
attaaggtccatgaatcagagatttcaactctagctgctctttcatctttgcaggtgctg
cgccagaatgatgatcctccagccgggtgttcagtatctatagtaaacgaaaacctttct
gtctacttaaagcttcaaggaaatattaatgtcgaagctgaacttgagaagctaaagaaa
aagatggaggagatacagaagcaatgtgataacctgaacaaaatgatgggcgcttccggc
taccagcaaaacgctccaagacatgtccgtgaagaggatcaggccaggcttgaaatgctc
atgcaacaactttctctttgtgaagatgccacccagcgattaggaaaggcaactgatgca
tcagaaaatggtggaaatggtaactag
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