Daucus carota (carrot): 108227341
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Entry
108227341 CDS
T05350
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1A isoform X2
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00270
Cysteine and methionine metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108227341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108227341
03032 DNA replication proteins [BR:
dcr03032
]
108227341
03036 Chromosome and associated proteins [BR:
dcr03036
]
108227341
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
dcr02048
]
108227341
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
108227341
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108227341
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
108227341
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108227341
Prokaryotic defense system [BR:
dcr02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
108227341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
108227341
NCBI-ProteinID:
XP_017257920
LinkDB
All DBs
Position
6:39577332..39585888
Genome browser
AA seq
1545 aa
AA seq
DB search
MGSSAVVDAPALDAGLETKKNKRKNADCDSEKTAVSGQKKQRAHALKSSETPVGSRKMPK
RAAACADFKEKSIQISKKSSIIETKKDRSVDEEEVAVRLTAGQEDGRPCRRLTDFIFHNS
DGIPQAFEMLEVDDLYISGLILPLEDSSQKEACSIKCEGFGRIENWALSGYEEGVPTIWV
STDVADYDCVKPSASYKKHYEHLFAKATACVEVYKKLSKSSGGNPDLSLDELLAGVVRGL
SGMKCFSRSVSIKDFIISQGDFIYNQLVGLDETSKKTDQQFLELPVLIALREESSKHGDP
SIGKVASTNGTLTIGPKIKDGENKKDSATEEDEGVKVARLLQEEEFWNSMKQKKGRGSST
SSNKYYIKINEDEIANDYPLPAYYKTANQETDEYIIFDGGADACYTDDLPRSMLHNWALY
NSDSRLISLELLPMKPCADIDVTIFGSGVMTEDDGTGFNLDGDTSQSSSAGLGTANVDGI
PIYLSAIKEWMIEFGSSMVFISIRTDMAWYRLGKPSKQYASWYEPVLKTARVAISIITLL
KEQARVSRLSFMDVIKRVSEFEKGHPAYISSVPAAVERYVVVHGQIILQQFLEFPDEKIK
KSAFVIGLTNKMEERHHTKWLMKKKKLLQRDEPNLNPRAALAPVVSKRKAMQATTTRLIN
RIWGEFYSNYSPEDMKEGITGEDKEEEEPEEQEEIEEEEEKETLTALEKTPTPTSTPRKT
KSIPKVKDIRWNGKSVGETLSGEALYKQAIVYGTEIAVGGAVLVDDESAQLPAIYYVEYM
FETLNGIKMLHGRMLQQGSLTILGNTANECEVFLTNDCMDFELADVKKAVVEIRSRPWGH
QYRKVNANADKIYRAGVEERKKNGLETEYYCKSLYCPDKGAFLSLPLNSMGLGSGICSSC
KLDKDLTEKEKFVVHSDKTSFVFNGTEYSIHDFLYVSPQQFSTERVGNETFKGGRNVGLK
AYAICQLLEIIVPKAPKQAEPHSTEIKVRRFYRPEDISDEKAYCSDIREVYYSEETHTID
AETVEGRCEVRKKNDLPSCDAPTIFDHVFFCEYLYDPAKGSLKQLPPNIKLRYSAVKGAH
VSSLRKNKGKCKEGEDDLDSLKSKVNCLATLDIFAGCGGLSEGLQKSGVCTTKWAIEYEE
AAGDAFKLNHPESLMFINNCNVILKAIMDKTGDADDCISTPEAAELAAKLSEEEIKNLPL
PGQVDFINGGPPCQGFSGMNRFNQSSWSKVQCEMILAFLSFADYYRPKYFLLENVRTFVS
FNKGQTFRLAIASLLDMGYQVRFGILEAGAYGVPQSRKRAFIWAASPEETLPEWPEPMHV
FAAPELKIALPENKYYAAVRSTQTGAPFRSITVRDTIGDLPMVSNGASRTSIEYQMDPIS
WFQKKIRANMMVLTDHISKEMNELNLIRCQRIPKRRGADWQDLPDEKVKLSSGQLVDLIP
WCLPNTAKRHNQWKGLFGRLDWEGSFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQ
GFPDSYQFYGNILHKHRQIGNAVPPPLAYALGMKLKEALESKGCM
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttcagctgttgttgatgctccagctctcgatgcaggtcttgaaacgaagaaa
aataagcgaaagaatgcagattgtgattctgagaagacagcagtaagtggccaaaagaaa
cagagagcacatgccttaaagagtagtgagacacctgttggctcccgtaaaatgccaaag
cgtgctgctgcttgtgcagatttcaaagagaaatctattcaaatatctaagaaatcttca
atcattgaaacaaaaaaggaccgttctgtagatgaagaggaagtagctgttcggttaacg
gctggacaagaagatggtcggccatgtaggaggctaactgactttatattccataattct
gatggcataccgcaggcctttgaaatgttggaagttgatgatttatatatctctggcctg
attttgcctcttgaggacagctcccaaaaggaagcatgtagcatcaaatgtgaagggttt
ggacgaattgagaactgggctctatctggctatgaagaaggggttccaacaatatgggtc
tcaactgatgttgcagattatgattgtgtcaaaccatcagctagttacaagaagcactat
gaacatttatttgccaaagctactgcttgtgttgaggtgtacaagaaactgtcaaaatct
tcaggtggaaatcctgatctgagtttggatgagttgcttgctggggttgttcgtggactg
agtggtatgaaatgcttttctcgtagtgtatccatcaaagatttcattatatctcagggt
gactttatttacaatcaacttgttggcttggatgagacatctaagaaaactgatcagcaa
tttcttgagctaccagtccttatagctttaagagaagaaagtagcaagcatggagaccct
tctatcggaaaggttgcatctactaatggaacattaacaattggtccaaaaattaaagac
ggtgagaacaaaaaggattctgcaacagaggaagatgagggtgtaaaagtggcaagattg
ttgcaggaagaagagttctggaactcaatgaagcagaaaaaaggccggggatcaagcact
tcttctaacaaatattacataaaaattaatgaggatgagattgctaatgactatcctcta
ccagcatattacaagacagctaaccaagaaacggatgaatatataatttttgatggcggt
gctgatgcgtgttatactgatgatttgcctcgaagtatgcttcataactgggcattgtac
aactctgactcgaggctcatttccttggagctccttccaatgaaaccctgtgctgatatt
gatgtcactatatttggatcaggggtgatgactgaggatgatggaactggattcaatctt
gatggtgacacgtctcaatcttcctcagctggattggggacagcaaatgttgatgggatc
ccaatatacctgagtgctataaaggaatggatgattgaatttggatcctcaatggttttt
atatcaattcgcacagatatggcctggtataggcttggtaagccatcaaaacagtatgca
tcgtggtatgaaccagttcttaaaacggccagggtcgctataagtattattacattatta
aaggagcaggccagggtttctcgtctttcttttatggatgtcattaaaagagtttcggag
tttgaaaagggtcatcctgcttacatatcatctgttccggcagctgttgagagatatgta
gttgtgcatggacaaataattttgcagcagttcttagaatttcctgatgagaagattaaa
aagtctgcatttgtgattggtctcacaaacaaaatggaagaaaggcaccacactaaatgg
cttatgaagaagaagaagttattgcagagggatgaaccaaacttaaatcccagagcagcc
ctagcccctgtagtgtctaaaaggaaggctatgcaggcaacaactacacgactaatcaac
agaatctggggtgagttttattcgaactactctccagaagatatgaaagagggaataact
ggtgaagataaggaggaagaagaacctgaagagcaagaggaaattgaggaggaagaggag
aaggaaacattgactgctttagaaaaaactcctacacccacctcaacgccaagaaaaaca
aaatcaattcctaaagtgaaggacataaggtggaacggtaaatctgttggtgaaacatta
agtggtgaagctctatacaaacaagcaatagtttatggaactgaaattgcagttgggggt
gctgttctggtggatgacgaatctgcccaacttccagccatctattacgtggagtacatg
tttgaaactttgaatggcataaaaatgcttcatgggagaatgttgcaacaaggatcccta
acaatactcgggaatacagcaaatgaatgtgaagtatttctcacgaatgattgtatggat
tttgaattagcggatgttaaaaaagctgttgtagaaattcggtcaaggccttggggacac
cagtacagaaaagtgaatgcaaatgctgataaaatctatagagcaggagttgaggagagg
aaaaagaatggattggaaactgaatactattgcaaaagcttgtattgtccagataaaggt
gcttttcttagccttcctcttaatagtatgggtctgggttcaggcatatgcagctcttgc
aaattagataaagatctcactgaaaaagaaaaatttgtagtccactcagacaagacaagt
tttgtgttcaacggaactgaatattctattcatgattttctctacgtgagtcctcagcaa
tttagtacagaaagggtagggaatgaaaccttcaagggtggaagaaatgtgggattaaaa
gcttatgctatatgtcaactactcgaaattattgtccccaaggcacccaaacaagctgag
ccacattctactgagattaaggtaaggagattttaccggccagaagacatttcagatgag
aaggcatactgctctgacattcgagaggtttattacagcgaagaaacacatacaattgat
gccgagacagttgaagggagatgtgaagtgaggaaaaagaatgatcttccatcatgcgat
gcgcctactatttttgatcatgtattcttttgcgaatatctgtacgatcctgctaaagga
tctctcaaacagttgccaccaaatatcaaattgaggtattcagctgtgaagggtgcacat
gtttcttctcttagaaagaacaagggtaagtgtaaggaaggggaggatgatttagattct
ctgaaatcaaaagtaaactgtttggcaaccttagacatctttgctggttgcggaggcctt
tcagaaggattgcagaaatccggtgtttgtacaacgaagtgggcaattgagtatgaagag
gctgctggagatgcatttaagcttaaccatccagagtcgttgatgtttatcaataattgc
aatgttattttaaaggctatcatggataagactggagatgcagatgattgtatttcaacc
ccagaggctgcagaattagctgcaaaattaagtgaggaggaaataaagaatttgccgctg
ccaggacaagtggattttattaatggagggcccccatgtcagggattttctggaatgaat
agatttaaccaaagcagctggagtaaagtccagtgtgagatgattttggcgttcttatcc
tttgctgattattatcgaccaaagtattttcttcttgagaatgtcaggacttttgtgtcc
ttcaacaagggacagacatttcgtctagctatagcttcacttcttgatatgggttaccag
gttcggtttggtatacttgaggctggagcatatggagttcctcagtctaggaagcgagca
tttatctgggcagcatctcctgaagaaactctcccagagtggccagagcctatgcatgtc
tttgctgcaccagagctaaaaattgcattaccagaaaacaagtactatgctgctgtccgg
agtactcaaactggggcaccatttagatcaatcactgttagggatacaataggagatctt
ccgatggttagcaatggggcatctaggacaagtatagagtatcaaatggatcctatctcc
tggttccaaaagaaaatccgtgcaaacatgatggtcttgacagatcacatatcaaaagaa
atgaatgaactcaatctcattcgctgtcaaagaatccctaagcggcgaggtgctgattgg
caagaccttcctgatgaaaaggtcaagctgtcttccgggcaattagttgacttgatacct
tggtgccttccaaatacagccaagaggcacaaccagtggaaggggctgttcggaaggttg
gactgggagggaagttttccaacttctatcactgacccccaaccaatgggaaaggtcgga
atgtgcttccatcctgatcaggacaggattgtaacagtccgagagtgtgctcgttctcaa
ggcttcccagatagctaccagttttatggtaacattctacacaagcaccgacaaattgga
aacgctgttcctcctcctctggcgtatgcactggggatgaaactcaaagaagccttagag
agtaaggggtgcatgtag
DBGET
integrated database retrieval system
