Daucus carota (carrot): 108227367
Help
Entry
108227367 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108227367 isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00500
Starch and sucrose metabolism
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108227367
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108227367
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
108227367
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Storage polysaccharide
108227367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
108227367
NCBI-ProteinID:
XP_017257960
LinkDB
All DBs
Position
6:35500596..35510872
Genome browser
AA seq
601 aa
AA seq
DB search
MEALRSSLNCNHTRKIRVVHDNTKLKLKKKSCLFLSNSKRISPLRFCVRSAHVNLDSVKP
KGSVDQESEILVWPSPKDKIPFWKRDFPLSHVRAEGLPNIKDTDLLHIVHITAELAPIAK
VGGLGDVVTGLGRACLSRGHKVDIMLPFYECIHKHNINELELVTTYASYHDGNWVPTNAY
HGVVSGIEVIFIEPSNHFFKGESVYGGSYNELEAYLFFSRACLEWMQITGKEPDIIHVHE
WQTSVLPLLYWDMYHYLSLQKPRIVLTIHNMEHYGECSQEQLNKCGLDGSLYGTLDKAVD
DRTIGHNPERLSLLKGGIVYSNAVVTVSPTYLTETLCSGWLTRTLMQNRDKYIGILNGID
TTIWNPATDAFLPINYDALKVGGKKICKQFVQKGLGLASEDTENNNAAVRIPLIVCITRL
VAQKGLHLIRHAIKLVEQLGGQMIILGKASNTQVEREFEDLANLHNKDSNIRILLMYSEE
LSHMLYAAADMVLVPSIYEPCGLAQMIGMRYGAVPVVRKTGGLADTVFDIDDHSQPEMAN
GFVFEGIDEESLDGALHRAFSYYQEKPNDWNRTVQNVMKIDNSWNNTAGKYIDLYNSIRV
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgttgagaagcagtttgaattgtaatcatactcggaagatacgtgttgtccat
gacaacacgaagctgaagctgaagaagaagagttgcttgtttttatcgaattcgaagcga
atctctccgctcagattttgcgttcgatcagctcacgtaaacctagactctgtcaagcca
aaaggttcagtagatcaagaatctgaaattctggtctggccttctcctaaagacaaaatc
ccattctggaagagagattttcccctttctcatgtccgtgcagaaggtctgcctaatata
aaagacactgatcttctccatattgttcatataactgctgagctagcaccaatagctaaa
gttggtggtcttggtgatgttgttaccggactagggcgcgcatgtctatcaaggggtcat
aaagtagacattatgctcccgttttatgagtgtatccacaaacacaatataaatgagctg
gaactagtaactacatatgcctcatatcatgatggaaactgggtacctaccaatgcatat
catggagtagtttcaggcattgaagtgatatttattgagccttccaaccacttctttaaa
ggggaatctgtatatggaggctcatacaatgagctcgaagcatacttgttctttagccgt
gcgtgccttgagtggatgcagattactggaaaagagccagatattattcatgttcatgag
tggcagacaagtgtactacccctgctttactgggacatgtaccattatctctcgctccag
aagccaagaatagtattgacaatccacaatatggagcattatggagaatgcagccaggaa
cagcttaataaatgtggtcttgatggatctttatatgggactcttgataaggctgttgat
gatagaaccattggccataaccctgaaaggttgagtttactgaaaggaggcattgtgtac
agcaatgcagtggttacagtttctccaacgtaccttacagaaacactatgctctggatgg
cttacaagaaccttgatgcaaaatcgtgataaatacattggcattttaaatggtatagat
accacgatatggaaccctgctactgatgcttttttgcctataaattatgatgccctgaaa
gtaggtggcaagaaaatatgcaaacaatttgttcagaaggggctcggcttagcctcagaa
gatactgaaaacaacaacgccgctgttcggataccattgattgtttgcatcacgagactg
gttgctcaaaagggtcttcatctgattagacatgcaatcaaacttgtggaacaacttggt
ggacaaatgatcattctaggaaaggcatccaatactcaagtggaaagggagtttgaagat
cttgcaaatttgcataacaaagactctaacatccggatccttttgatgtatagtgaggaa
ctgtcacatatgctttatgctgcagcagacatggttttggtgccttcaatttacgagccg
tgtggacttgctcaaatgatcggaatgcgatatggagcggtccctgtagttagaaagacc
ggtggcctggctgacacagtcttcgacattgatgatcattcacaacctgagatggcgaat
ggctttgtctttgaaggaattgatgaagaatccttggatggagctctgcaccgcgcattt
tcatactaccaagagaaaccaaatgactggaatcgcacagttcagaatgtgatgaaaatc
gataatagctggaacaacaccgcagggaagtacattgatctctacaactctatcagggta
aaataa
DBGET
integrated database retrieval system
