Daucus carota (carrot): 108227377
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Entry
108227377 CDS
T05350
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108227377
03009 Ribosome biogenesis [BR:
dcr03009
]
108227377
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108227377
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
90S particles
RNase
108227377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
108227377
NCBI-ProteinID:
XP_017257975
UniProt:
A0A161ZWS8
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All DBs
Position
6:complement(38820289..38824547)
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AA seq
420 aa
AA seq
DB search
MKIAVEGCMHGDLDNVYATLLHLQQSENTTIDLLLCCGDFQAVRNEDDLESLNVPAKFKA
MNSFWKYYSGQKVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI
GGLSGIYNERHYRLGHYEKLPYNEGHIRSIYHVREYDVHKLMQVEQPLDIFLTHDWPCGI
TDYGNWKELVRQKPYFEKEIQDRSLGSKPAAELLQKLKPPYWFSAHLHCKFAAVVQHGEG
GPMTKFLALDKCLPGRKFLQIVEIESEPGPYEIQFDEEWLAITRKYNSIFPLTSKPANFR
EIQLDKQECMQWIRGKLQQRGAKPFEFVQTVRGYDPSLSSSRGSYTGHHRNPQTEAFLQF
LELKYYLDNAMETRDQIHSPPMFIANGPSDHNYEDIPIDDVDELEELSEVNDADKVTSVP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagccgtagaaggatgtatgcacggagacctagacaacgtctacgccactctc
ttacacttacaacaatcggagaacaccacaatcgatcttctcctctgttgtggcgatttt
caggctgttaggaatgaggatgatctggagagtttgaatgttccggcgaagttcaaggcg
atgaattcgttctggaagtattattcggggcagaaagttgccccgattccgacgattttc
atcggtgggaatcacgaggcgtcgaattacctctgggagctatactatggaggatgggcg
gcaccgaatatatacttcttggggtttgctggagtggtcaagttcggaaacattcggata
ggtggactctctggaatttataatgagcgtcattaccgtttaggacattatgaaaagcta
ccatataacgaagggcatatcaggtctatttaccatgttcgtgaatatgacgtccataag
ctcatgcaagttgagcaaccacttgatatatttcttacacacgactggccttgtggtatt
actgactatgggaattggaaagagcttgttcgtcaaaaaccatactttgagaaagagatt
caggacaggtctctggggagtaaacctgccgcagaattactgcaaaaactgaaacctcct
tactggttttcagctcatctgcactgcaaatttgcagcagtagtacaacatggagaaggt
ggtccaatgactaaatttcttgcacttgataaatgtctcccaggacgaaagtttttgcag
attgtagagattgaatcagagccaggaccatatgaaattcagtttgatgaagaatggctg
gcaataactcggaaatataattccatctttcctttaacttccaaacctgcaaattttagg
gaaatacagcttgacaagcaagaatgtatgcaatggatcaggggtaaattacaacaaaga
ggagccaaaccatttgaattcgtacaaactgttcgcggatatgatccttctctgtcttct
tctcgtggttcatatactggacatcatcgaaaccctcaaacagaagcttttttgcagttt
cttgaactcaagtattatcttgataacgcaatggaaacaagggatcaaatccatagtcca
ccgatgtttattgcaaacggtccatctgatcataattatgaagatattccgattgatgat
gtggatgaattggaagaactttcagaagttaatgatgcagataaagtgacgagtgtccca
taa
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