KEGG   Daucus carota (carrot): 108227403
Entry
108227403         CDS       T05350                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108227403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dcr03041]
    108227403
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108227403
Spliceosome [BR:dcr03041]
 Complex B
  Other components
   Prp19 complex
    108227403
 Complex C
   Prp19-CDC5 complex
    108227403
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    108227403
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect TrbH
Other DBs
NCBI-GeneID: 108227403
NCBI-ProteinID: XP_017258014
UniProt: A0AAF0X837
LinkDB
Position
6:4630084..4637497
AA seq 990 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDNRHRKRKRKGIDYNAEIPFEKKPPPGFYDVTDESRTVEQPKFPT
TIEELEGEKRSDKEARLRKQDAARNKIAQRQDAPAAILQANKLNDPEAVRKRPKMNLPTP
QIPDHELEHIAKIRLPASNEELTEGSGATRALLADYAHTPRQGATSLRTPQRTPAGKHDA
IMMEAENQARLRLSQTPLLGGENPELHPSDFSGVTPRKMEIQTPNVMMTPSVTPSPGGAG
LTPRIGMTPTRDGPSYGMTPKGTPIRDELHINDEMDMHDSAKLELRRQADLRRNLRSGLT
SLPQPKNEYQIVVQPIPEDNEEPEEKMEEDMSDRIAREKAEEEARMQALLKKRSKVLQRE
LPRPPSASLELLKNSLLRADEGKSSFVPPTLIEQADEMVRKELVSLLEHDNIKYPIDEKV
QKEKKKVTKRTTKGNSALVPLIDQYEEDELKEADLLIKEESQFLCMAMGHESESFDEFVE
AHNTCVNDIMYFPTRNAYGLSSVAGNMEKVAALQDEFENVRSRMDDDTKKAQRLEQKIKL
LTNGYQHRATNLWSQVEATFKLMDDAGTELNCFQALRNQEQLAASHRVNTLWEEVQKQKE
LEQTLQKRYGNLLSEQERIQGMMNEFRAKAREENAAKQHALELAEAAEKQHALELAEAAE
KQHALEVAEGAEKQHALELAEVEEKQRAVELAEVVETQHGVVVAEMEEKQNAGELTEPES
ERQLPGMKSAEDHTPELAKGEEEILGNQLSFEGNEAVALSEAIDFADAKDGESIQDGITV
TTITTSVSQTVTTVTTSVSQTGTDEEVKQE
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgaggataatgattaagggaggggtgtggaagaacaccgaagatgagatcttgaaagcg
gctgttatgaaatatggtaagaatcaatgggctcgcatctcttctcttcttgttcgtaaa
tctgctaagcaatgtaaggctcgctggtacgagtggctcgatccttccatcaaaaagact
gagtggaccagagaagaagatgagaagctactccacttggcaaagctaatgcccactcag
tggaggacaatcgctccgattgtgggtcgtactccatcacagtgtcttgagcgctatgag
aaactccttgatgcagcatgtgctaaagatgagaactatgagccaggagatgatccccga
aagttgcgtcctggagagattgaccctaacccagaatcaaagcctgctcgtcctgatcct
gttgatatggatgaagatgaaaaagaaatgctttcagaagcacgagctcggcttgccaat
acgagggggaaaaaggcaaaaagaaaagctagggaaaagcagcttgaagaagccaggcgg
cttgcatctttgcagaaaaggagggaattaaaggcagcaggaattgataataggcacaga
aagaggaaaaggaagggtatcgactataatgctgaaattccctttgagaagaagcctcct
ccaggcttttacgatgtaactgatgaaagtcgaacggttgaacagccaaagtttccaaca
actattgaggaacttgaaggtgaaaagaggtctgataaggaagcccgtttgagaaagcaa
gacgctgctaggaataagattgcacagaggcaggatgcgcctgcagctatactgcaagca
aacaagcttaatgatccagaagcggttagaaagaggccaaaaatgaatctccctacacct
cagattccagaccatgaactggagcatattgcaaaaattaggcttcctgcttcaaatgaa
gaactaacagaagggagtggtgccacacgtgctcttcttgcagactatgctcatacacca
cgtcagggagcaacatcattacgaaccccacaaagaactcctgcaggtaagcatgatgca
ataatgatggaagcagaaaaccaggccagattgagattgtctcagacaccgttactagga
ggggagaacccagaactgcacccttctgatttttcaggtgttactccaaggaagatggaa
attcaaacaccaaatgttatgatgactccctcagtaactcctagtcctggaggtgcaggt
ctaactcctagaatcgggatgacacctacgagggatggtccttcatatggtatgacacct
aaaggaactccaattagggatgagctgcacatcaatgatgagatggatatgcatgacagt
gcaaaacttgagttgcgaagacaagctgatttgagacggaatctgcgttctggtttgacc
agcctcccgcagccaaaaaatgaatatcagattgtggttcaaccgattcctgaagacaat
gaagagccagaagaaaagatggaagaagatatgtctgataggattgctagagaaaaagct
gaggaggaagctaggatgcaagctttacttaaaaaaaggtcgaaagtactgcagagagag
ctccctagacctccctctgcttcactggaacttctcaaaaattctttgcttagagctgat
gagggtaagagctcctttgttcctcctactttgattgaacaagctgatgagatggtaaga
aaggagctcgtgtccttactcgagcatgataacatcaagtatccaattgatgaaaaagtt
cagaaggagaagaaaaaagttacaaagcgaactacaaagggaaattctgctcttgtcccc
ttaatagaccaatatgaagaggacgagttaaaggaggctgatcttttaattaaagaagaa
tcccaatttctctgtatggcgatgggtcatgagagtgaatcctttgatgagtttgttgaa
gcacacaacacatgcgtaaatgatatcatgtattttcctacccgcaatgcttatggtctg
tcgagtgttgctggaaacatggaaaaggttgctgcgttacaggatgagtttgaaaatgtg
aggagcaggatggacgatgatactaaaaaggctcagcgccttgaacaaaagattaaactt
ttaacaaatggttatcagcatagagctacaaatctttggtcacaagttgaggcaactttc
aagctaatggatgatgctggtacagagcttaattgcttccaagctttgcgtaatcaggag
cagcttgcagcatctcacagagttaatacgctctgggaagaagttcagaagcagaaagag
cttgagcaaactttacaaaaacgctatggtaatcttttgtcagagcaagaaagaattcag
ggcatgatgaatgaatttagagcaaaagctcgagaagagaatgcagcaaagcagcatgct
cttgagttggctgaggccgcggagaagcagcatgctcttgagttggccgaggctgcggag
aagcagcatgctcttgaggtggctgagggtgcggagaaacagcatgctcttgagttggct
gaggttgaggagaagcaacgtgcagttgagttggctgaggtagtggaaacacagcatggt
gttgtggtagctgagatggaggaaaaacagaatgctggtgagctgactgagcctgagagt
gaaaggcagctccccggaatgaaatctgccgaggaccacactcccgagctggccaaaggc
gaggaagaaattttgggaaaccaattatcttttgaggggaatgaggccgtggctttatcc
gaagccatagattttgctgatgctaaggatggtgaaagtattcaagacggcattacggtg
acaactatcacaacttccgtcagtcaaaccgtgacaactgtgacaacttcagtcagtcaa
actgggacagatgaggaggtaaaacaagaataa

DBGET integrated database retrieval system