Daucus carota (carrot): 108227454
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Entry
108227454 CDS
T05350
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03030
DNA replication
dcr03410
Base excision repair
dcr03420
Nucleotide excision repair
dcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108227454
03410 Base excision repair
108227454
03420 Nucleotide excision repair
108227454
03440 Homologous recombination
108227454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108227454
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108227454
Enzymes [BR:
dcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108227454
DNA replication proteins [BR:
dcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
108227454
DNA repair and recombination proteins [BR:
dcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
108227454
NER (nucleotide excision repair)
GGR (global genome repair) factors
108227454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
DUF5434
Motif
Other DBs
NCBI-GeneID:
108227454
NCBI-ProteinID:
XP_017258083
LinkDB
All DBs
Position
6:15368409..15381042
Genome browser
AA seq
1099 aa
AA seq
DB search
MASLGISTQSAPFKPPFHPYIWLSSSRSFWRASPKMALLRSQVCTIASAKKHSLNVTTTI
GSINLNKSSSYTNLPINNNSRFEDPRKMSCASVQALREVEEHKPITSLATSGTPELTKPN
SSKGWDELVQRMKLQKLESSKNNISYRASVSMQNKDERIHNGKFHSYDLDHIAMRGASKK
STEVEQKNDVPFNLHSSVAQPRVDSERYEANNKRERGYINGLSGDASTQQHNTVSNNDHS
SQTLGNEGEQNISVTCIPKAQPNGLSVKHLIEKMERSPGKDENLANGGSKKDPDTSETYV
VEISAERTNGHLREKLNRIYDKVLVVDNVAAAKEIVEKLTNQYRHLVHACDTEVAGIDVK
QETPVNHGEIICFSVYSGPQATFGNGKSCIWVDVLDGGGKDMLAIFAPFFEDPSIKKVWH
NYSFDNHIIENYGLKVSGFHADTMHMARLWDSSRRIIGGYSLEVLTSDRKVMSAAGVCPS
EGLIGKISMKTIFGRRKLKKDGSEGKVIVIPPVEELQRVERKPWVSYSALDSISTLQLYE
SLKNKLSCMEWQVNGVKEGSMFTFYEKYWRPFGELLVNLETQGMLVDRTYLAEIEKVAIA
EQQIAADRFRNWASKHCPDARYMNVGSDTQLRQLFFGGTANRKTGDILQEEKEFKIPNVD
NIIEEGKKKATKFRKITLHKIGEEMRSEQYTASGWPSMSGVALKALSGKVSAEYEFADES
LDSEPDGSIEIPEMEENEGAITDTSAYGTAYSAFGGGSKGMEACHAIASLCEVCSIDSLI
SNFILPLQGDHISGKNGRIHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAP
GNSLIVADYGQLELRILAHLANCKSMLDAFKSGGDFHSRTAMNMYPYIRDAVEHKDVLLE
WYPQPGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTTVGLARDWKVSLKEAEETVKRW
YSDRKEVLNWQELRKKEAREKGHVHTLLGRARKFPSASTYAQRGHIERAAINTPVQGSAA
DVAMCAMLEIVKNARLKELGWKLLLQVHDEVILEGPTESAEVAKAIVVDCMSKPFNGQNI
LKVGLSVDAKFAQNWYAAK
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactggggatttctactcagtctgccccttttaagcccccttttcatccttat
atttggttgtcctcttctcgttccttctggcgtgcttcccctaaaatggctttgctcaga
tcacaagtttgcacaattgcgagcgccaaaaagcattctcttaatgtgaccactactatt
ggttctattaatttgaacaagagttcgagttatacaaatttgccaattaataacaactct
agatttgaggatccaagaaagatgtcgtgtgcctctgtccaggcattgcgggaagtggag
gagcataaaccaataaccagtcttgctacttccggtacgcctgaattaacaaagcccaat
agtagtaaaggatgggatgagctggtgcaaagaatgaaacttcagaaactagaaagtagt
aagaataatatatcttacagagcgtcagtaagcatgcaaaataaggatgagagaatacat
aatggcaaatttcattcttatgaccttgatcatattgcaatgagaggagcttcaaagaag
tcaactgaagtagaacagaaaaatgatgtgccgtttaacttgcattcttcagtagcgcag
ccaagagttgatagtgaaagatatgaagctaataataagcgtgagaggggctatataaat
gggttgtcaggagatgcttctacccaacaacacaatacagtgtctaacaatgatcatagt
agtcaaacacttggtaatgaaggggaacagaatatctctgtgacatgtatacctaaagct
caacctaatgggttatcagtgaaacacttaatagaaaaaatggaaagaagtccaggaaaa
gatgaaaatttagctaatggtggaagcaaaaaagatcctgatacaagtgaaacctacgtt
gtggaaatcagtgctgaacgaacaaatggacatcttcgcgagaaactcaatcgtatatat
gacaaggttcttgttgttgacaatgttgctgcagccaaggaaattgtcgagaagcttaca
aatcagtacaggcatctcgtccatgcatgtgacacagaggtggccggaattgatgtaaag
caagaaactcctgttaaccatggagaaattatatgtttcagtgtttattctggaccccaa
gcaacttttgggaatggaaagtcatgtatctgggtagatgttcttgatggcggtggcaag
gatatgttagccatatttgctccattttttgaagatccatccattaaaaaggtctggcac
aactatagtttcgataaccatattatagaaaactatgggcttaaagtttctggtttccat
gctgacactatgcatatggctcgactatgggattcttcaagaagaataattggaggttat
tctttagaagtacttacaagtgatcgtaaggttatgtctgctgctggagtctgccctagc
gaagggctcattggtaaaatctcaatgaaaaccatctttggcaggagaaagcttaagaaa
gatggatctgaaggaaaagttattgtcattcctcctgttgaagagcttcagagagtggag
cgtaaaccatgggtttcttattctgctttggattctattagcacactccagctctacgag
agcttgaaaaataagttgtcctgtatggaatggcaagtcaatggagttaaagaagggtca
atgttcactttttatgagaagtactggcgtccatttggtgaactcctggttaatttggaa
actcaagggatgctagttgatcgaacttatcttgctgaaattgagaaagtggctatagca
gagcaacaaattgctgcggatagatttaggaattgggcatccaagcactgtcctgatgcc
agatacatgaatgttggaagtgatacacagcttcgccagctattttttggcggcacggcc
aacagaaaaactggtgatatacttcaagaggagaaagaatttaaaattcctaatgttgat
aacattattgaagaaggaaagaagaaagccacaaagttccgcaaaattactctgcacaaa
attggagaagaaatgcgaagtgaacagtacacggcaagtggttggccctctatgagtgga
gtggctttgaaagccctctctggtaaggtatcagcagaatatgaatttgcagatgaatcc
cttgactctgagcctgatggaagtattgaaatacctgaaatggaggaaaatgaaggagct
atcactgatacctcagcatatggcactgcttattctgcatttggaggggggtcaaagggc
atggaggcctgccatgccatcgcttctttatgtgaagtttgctctatcgactcattaata
tctaacttcatccttcctttgcagggggatcatatatctggaaaaaatggccgcattcat
tgttcactaaacatcaatactgaaactggaaggttatcagctagaaggccaaatctgcag
aatcaacctgctttagagaaggatcggtacaagatccgccaagcatttatagctgcacca
ggaaactcccttatagttgctgattatgggcagttggaacttaggatactagcacatctt
gccaactgtaagagcatgctggatgccttcaaatctggtggagattttcattcgaggact
gcaatgaacatgtatccatacatccgtgatgccgtggagcacaaagatgtacttcttgaa
tggtatcctcagcctggtgaagataaacctccagttcctttattaaaggatgcttttgct
tcggaaagaaggaaagcgaagatgcttaatttctcaattgcttatgggaaaaccactgtg
gggctagctcgcgattggaaggtttctttgaaggaagcagaagaaacagttaagcgctgg
tatagtgatagaaaagaagtgctgaactggcaggaactaagaaaaaaagaggctcgcgag
aagggacatgtccacacattgctgggacgtgctcgcaagttcccgtcagcttctacttac
gcccaaagaggtcacattgagcgtgctgcaattaataccccagtacagggtagtgctgct
gatgttgctatgtgtgccatgctagaaatagtaaagaatgctcgtctaaaggaacttggg
tggaaattgcttttacaggttcatgatgaagtaatcctcgaagggccgacggagtctgct
gaagtcgccaaggctatagttgttgattgcatgtccaagccatttaacggccagaatatt
cttaaagttggcctttcagttgatgccaaatttgctcaaaactggtatgctgccaagtag
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integrated database retrieval system
