Daucus carota (carrot): 108227461
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Entry
108227461 CDS
T05350
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108227461
03036 Chromosome and associated proteins [BR:
dcr03036
]
108227461
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108227461
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108227461
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108227461
microRNA pathway
RISC loading complex
108227461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108227461
NCBI-ProteinID:
XP_017258095
UniProt:
A0AAF1B260
LinkDB
All DBs
Position
6:551439..559421
Genome browser
AA seq
1093 aa
AA seq
DB search
MVRKRRTELPGGGESSGPQDSSAGHGAPQRPPQQQPQQQGQVSPQRPSQQQQQPQQQQGR
GAPQRPPQQLQQQGGVRGSAPQQPGGAYQGRGGYDGGRGGPRGGMAPQQYTGGPQEFFQQ
PRGPVPQSRGGVASGARGGFVSSAGGPSRPSVPELHQATQAPQQAGVMTQPMPHVLPAED
TQSVASPVVRAANPSSLQLTQKFQQISMTPESSSTEAVQSIPMSTKSLRFPPRPGRGSTG
SRVIVKANHFFAELPDKDLHQYDVSISPEVSSRGVNRAVINQLVKLYKETHLGKRLPAYD
GRKSLYTAGPLPFISKEFKIVLTDEDDGSGTARREREFKVVIKLASRADLHHLEMFLTGR
QADAPQEALQVLDIVLRELPTARFSPVGRSFYSADLGRRQPLGEGLESWRGFYQSIRPTQ
MGLSLNIDMSSTAFIEPLPVIDFISQLLNRDVSSRPLSDADRVKIKKALRGVKVEVLHRG
SMRRKYRICGLTSQATRELTFPVDDGGTIKSVVEYFQETYKFTLKQTQWPCLQVGNLQRP
NYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPSDREKDILQTVEHNAYADDPYAKE
FGIKISDKLASVEARVLSPPWLKYHDTGREKECLPQVGQWNMMNKKMVNGGIVNNWMCLN
FARNVQDSLASGFCSELAQMCTISGMRFNPDPVLPPTSARPDQVERVLKTRHQEVMKLKK
ELDLLVVILPDNNGSLYGDLKRICETELGIVSQCCLTKHVFKMSKQYLANVALKINVKVG
GRNTVLREAVSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGL
VCAQAHRQELIQDLYKSWQDPNRGTIVHGGMIKELLISFRRATGKKPERIIFYRDGVSEG
QFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFVNNHRDRNQVDRSGNILP
GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFSADGLQSLTNNLCYTYAR
CTRSVSIVPPAYYAHLAAFRARFYMEPETSDGESMASAAGRGVGRNTRAVNANAAVRPLP
ALKENVKRVMFYC
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaagaggagaactgaacttccaggtggaggcgagagctcggggccccaggat
tctagtgcaggacatggtgcaccccaacgccctccacagcagcagccacaacagcaagga
caggtttcacctcaacgcccttctcagcagcagcagcagccccaacagcagcaaggaaga
ggggcacctcaacgccctccacagcagctgcagcagcagggaggagttagaggttcggcc
ccacagcaaccgggaggtgcataccaagggcgtggtggatatgatggtgggcgtggtggc
ccgcggggtggaatggctcctcagcagtatactgggggacctcaagagttttttcagcaa
cctcgtggacccgtgccccagagccgtggtggtgtggcaagtggtgcccgtggaggattt
gtatcatctgctggtggaccttctaggccatcagttcccgagttgcaccaagctacccag
gctccccagcaagcaggggtaatgactcagcccatgcctcatgtattaccagcagaagac
actcaatctgtagccagtcctgtagtcagagcagctaatccatcgtccttgcagttgaca
caaaagtttcagcagatctctatgacgccagagtcatcttcgaccgaggctgttcagtct
attcccatgtcaactaaatctttgagatttccacctcgtccaggaaggggaagcactggt
tcccgagttattgttaaggcgaaccatttctttgctgaactgcctgataaggatttacat
caatatgatgtttcaatctctccggaggtcagttctcgtggggtgaatcgtgctgtgata
aaccagcttgtgaagttgtataaagaaactcatcttgggaagcgccttcctgcttatgat
ggcagaaagagtttatatacagctgggcctcttccttttatctccaaagagttcaaaatt
gttctcactgatgaagatgatggatcgggcactgcaaggagggaacgggaatttaaagtt
gttatcaaattagcttcacgagctgacttgcaccacctggagatgtttctaactgggagg
caggctgatgcacctcaagaagctctgcaggttttagacattgttctaagggaactgcct
actgctaggttttctcctgtgggacggtcattctattctgctgatcttggacgaaggcag
ccgttgggtgagggtctagaaagctggagaggtttttaccagagcatacgaccaacacag
atgggattatcactgaacattgatatgtcctccactgcgtttattgagcctcttcctgtt
attgacttcatctcgcaactgttgaatagggatgtttcatcgagaccattgtcggatgct
gaccgtgtgaagatcaaaaaggctttgaggggtgtaaaagttgaggttttacaccgtgga
agtatgcgcagaaagtatcgcatttgtgggttaacatcacaggcgacaagagagctcact
ttcccagtagatgacggaggtactatcaaatctgttgtggagtattttcaagagacatac
aagttcacgctaaaacagactcaatggccttgcttacaagttggcaatctacaaagacca
aattatctacccatggaggtttgcaagattgtagagggacagagatactcgaaaaggtta
aatgagaggcagattacagcattgctaaaagttacttgtcaacgccctagcgatagggag
aaggacatcctccagactgttgagcataatgcatatgctgacgatccttatgcaaaggag
tttggaatcaaaattagtgacaagctagcctcagtagaagctagagttctctctccacca
tggctaaaataccacgatactggacgggagaaggaatgtttgcctcaagttggccagtgg
aatatgatgaataagaaaatggttaacgggggaattgtcaataattggatgtgcttgaac
tttgcacgtaatgttcaagatagtttggccagtggtttttgttctgaacttgcacaaatg
tgtacaatttcaggaatgaggttcaatcctgatcccgttctccctccaaccagtgcacgt
cctgatcaggtcgagagagtattaaaaacaagacatcaggaggttatgaaactcaagaag
gagcttgacttgttggttgtgattctaccagataataatggctctctttatggtgacttg
aaaagaatttgtgagaccgaactcggaatagtgtcgcagtgttgcttgacaaaacatgtc
tttaagatgagcaagcagtatctggcaaacgtggccctgaagatcaatgtcaaggttgga
ggaagaaatactgttcttcgtgaggcagtgtctaggcggattccacttgtgagcgaccga
cctactataatttttggtgctgatgtcacacatcctcatcctggagaagattctagtcca
tcaatagcagcagtggttgcatctcaagattggcctgagatcaccaagtatgctggcttg
gtctgtgcccaagcccatagacaggagctcatccaggatctgtacaagagctggcaggat
ccgaacagggggactatagttcatggtggcatgattaaggagctgctgatttcattccgc
agagcaactgggaaaaaacctgagcgcattattttctacagggatggtgttagtgagggg
caattctatcaagttcttctctatgagcttgatgcgattcgcaaggcatgcgcttcattg
gagcccaattatcagcctcccgtgacatttgttgtggttcagaaacgccatcacacaagg
ttgtttgtcaacaaccatcgtgaccgtaatcaagttgataggagtggaaatattttgcct
ggtactgtggttgattctaaaatctgtcaccccactgaattcgacttctatctgtgtagc
catgcgggcattcaaggaaccagccggccagcacattatcacgttctgtgggatgagaac
aagttttctgcagatggattgcaatcccttaccaacaatctatgttacacatatgccagg
tgtacacgatcagtttcaattgtgccaccagcatattatgctcacttggcagcctttcga
gctcgcttttacatggaacctgagacttctgatggtgagtcaatggcgagtgccgctggt
cgtggagttggaaggaacaccagggcagtaaatgccaatgcagctgttaggcccttgcct
gctctgaaagagaacgtgaaaagagtgatgttttactgctag
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