KEGG   Daucus carota (carrot): 108227478
Entry
108227478         CDS       T05350                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108227478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108227478
   03041 Spliceosome [BR:dcr03041]
    108227478
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108227478
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108227478
Spliceosome [BR:dcr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108227478
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 108227478
NCBI-ProteinID: XP_017258119
UniProt: A0A161YFB7
LinkDB
Position
6:30559069..30568186
AA seq 478 aa
MDLTKKRKLEDNGLLQPIFDLPTADVRKIISSFTTDQLLDIVQNAAVRHLDVLDAVRSIA
DQDLSQRKLFIRGLGWDTTNENLAAIFSAYGELDEAVVILDKATGKSKGFGFLTYKHIDG
AIRALKEPSKKIDGRMTVTNLASAGPGGGPVMQQPVDVSNRKIYVANVPFEMPADRLLGF
FLSYGEIEEGPLGFDKLTGKSKGFALFVYKSEDGAKAALVEPIKNIDGVQLNCKLAIEGK
KGKGGGGVQGEVHGIGVGVGLQQGGVVQGSGVVGQYGGAGGVTGYGGVVYPGGLQGPSPQ
VQHSQNPSFAGVGGPGYSSLPSQVPTSIGYNGSYGSVAGVGAPYGSSQYGGPGATGYGGL
GGSATRMGAGVGGLGGAGLGAGGLGGAATGLGRSGAASGLGGSASALGGSAAGLGGPGRM
SSLYGLQPNSAGIAAGTYSDSAHYSLSGGSAYQNQNNPTAGASPAARGPYSGMYPPRY
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggatctaacaaagaagcggaagctcgaggacaacggtctcctccagccaatcttcgat
ctccctaccgccgatgttcgcaaaatcatctcctccttcactaccgaccagctcctcgac
atcgttcaaaacgccgccgttcggcacctcgacgtgctggacgccgtgcgatcgatcgcc
gatcaagacttgtcgcagcggaagctcttcattcgaggcctcggttgggacacaaccaac
gagaatctcgccgcaattttttcggcgtatggagagctcgatgaagcggttgttatactc
gataaagctactggtaagagtaaaggtttcggctttttgacttataagcatattgatggt
gcgattagggctttgaaggagcctagtaagaagattgatggtagaatgacggttacgaat
ttggcgagtgcgggaccgggtggcggtccggttatgcaacagccggtcgatgtgtcaaat
aggaagatttatgttgccaatgttccgtttgagatgccggcggataggttgttgggtttt
tttttgtcttacggggagattgaggaagggccgttagggtttgataagttgacggggaag
agtaaggggtttgcactttttgtgtataagagtgaggatggggctaaggcggcgttggtg
gaaccgattaagaatattgatggtgttcagttgaattgtaagttggcgattgaggggaag
aaagggaagggaggtggtggtgtgcagggggaggtacatgggattggagttggggttggg
ttgcagcagggaggtgtggtacagggttcgggtgtcgtggggcagtatggtggggctggt
ggagtgactggttatggtggtgtggtgtatccaggaggattacaggggccttcgccacaa
gtccagcattctcagaatccatcgtttgcgggtgttggcggtcctggttattcttcactg
cctagtcaagtaccgacttccatcggttataatggcagctatggttctgttgctggtgtt
ggtgcaccctatggtagctcacagtacggtggccctggtgctacagggtacggaggatta
ggtggttcagctacccgaatgggtgctggagttggtggattaggtggtgcaggattaggt
gctgggggtttaggtggtgcagctacaggtttaggccgtagtggagctgcttcgggtctg
ggtggctctgcatctgcactgggtggttctgctgctggcttgggtgggcctggtcgtatg
tcttcgctgtatggacttcagccgaattcagcaggaatagctgcaggaacttactctgat
agtgcacattacagtttgtctggtggctctgcatatcagaaccaaaataacccgacggca
ggggcatctccagcagctagagggccatacagtggaatgtaccctcctcgatattaa

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