Daucus carota (carrot): 108227520
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Entry
108227520 CDS
T05350
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108227520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108227520
03036 Chromosome and associated proteins [BR:
dcr03036
]
108227520
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108227520
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
108227520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
108227520
NCBI-ProteinID:
XP_017258196
UniProt:
A0A161ZUD5
LinkDB
All DBs
Position
6:19387313..19398546
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AA seq
1204 aa
AA seq
DB search
MEDSNNTARNVAQAIVAVLEWNCPPDTRKAAVSYLESVKAGDVRVLANTSVLLVKKDWST
EIRIHALKLMQHVVRLRWDELSSNERRDFTNVAIGLLPEVAGPCEVWALKSQTAALIAEI
VRREGLSLWQELLPSLVSLSASGPLQAELVSIILRWLPEDITVHNEDLEGDRRRLLLRGL
TDSLPEILPLLYSLLERHFGAALSEAGMQQMDSAKQHAAAVTSILNAVNAYADWAPLPDL
SKYGIIHGCSFLLSAPDFRLHACDFFKLVSSRKRPVDADTAYDSAMSNVFQVLMNVSREF
LSKTGPHAATIDENEFEYAEYICESMVSLGTFNLKCISGDSTIIPFYLQQMLGYFQHFKL
DLHYQTLFFWLALLRDLLLKPKVIQHAAVDSSLNNLSSGSKQADDGKMNILSFLNEDIFS
IMLEITFQRMVKKERVQSGTAYGIGALELWSDDIEGKGDFSQYRSRLTELIRLITCSKPL
LAATKVSEKILIIINAFSLDPTAQNFAAMESMQFALDNIVSAIYGGSTDYNNNDSEIRVS
LGRILEGLLQQLLSLKWTEPTFVELLGHYLDAMGPFLKYHADAVGSVINKLFELLNSLPF
VVKDPATSTARHARLQICTSFIRIAKTAGKSLLPHMKAIADTMSYLQKEGGLLRGEHNLL
GEAFLIMASAAGVQQQQEVLVWLLEPLSKQWIQTEWQNEFLSDPNGLIRLCSETKFMWSL
FHTVTFFEKALKRSGVRKGSSSVLNTSSENYVPCHPMASHLSWMLPPLLKLLRGIHSLWS
PPVTQALPGEMKAAMVMSDVERTSLLGEGNLKSSRTALNFIDGTQFDMNKEGSTESNEND
IRNWLKGIRDSGYNVLGLSATIGDSFFKTMDAHSVALALLENVQSMEFRHMRQLVHSIYI
PLIKCCPSDMWELWLEKLLHPIFLYSQQALSCSWSSLKQEGRAKVPDRLGIPADSDLKVE
VMEEKLLRGLTREICTLLSILGSQGLNTGLPLVEQSGHVNRVDVSALKELDAFSSSSMIG
FLLKHKGLALLALQIVLDTFKWGDGESVTKVSSFCGSIVLLAVSSSNAELREFVAKDLFY
AIISSLEFDSNVNVSAELVGLCREIFVYLSDRDPAPRQVLLSLPCIAPQDLLAFEEALAK
TSSPKEQKQHMRSLLLLATGNKLKALANPKSVGVITNVSARPRSLVPAPEPRNEEGPIGL
AAIM
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcgaacaacacagcaaggaatgtggcgcaagcaatagtcgctgtacttgaa
tggaactgccctcctgatactcgcaaagctgctgtttcgtatctcgaatccgtaaaagca
ggagatgtgcgtgtcttggcaaatacatctgttctattagttaaaaaggattggtctacc
gaaattcgtatacatgccttaaaattgatgcaacatgtagtgcgattacggtgggatgag
cttagttctaatgaaagaagagacttcacgaatgttgccattggtttgttgcctgaagtt
gcaggtccttgtgaagtctgggctttgaaaagtcaaacagctgccctcatcgctgagata
gtccgtagagaaggtctaagtctttggcaggagcttcttccatcgctagtctccctttcc
gccagtggtcctctccaagctgagctggtgtcaattatattgaggtggcttccagaagat
atcacagttcacaatgaagacttggaaggtgataggcgaaggctgttgttacgtggacta
accgattcattgcctgaaatcttgccattattgtactctttactagaaaggcatttcgga
gctgctttaagtgaagcaggtatgcaacagatggactctgccaaacagcatgcagctgca
gtaacatctattctgaatgctgtcaatgcctatgcggattgggctcctttacctgatctt
tcaaaatatgggataattcatggctgtagcttcttactctcagcgcccgactttcgtctt
catgcatgtgattttttcaagctcgtctcttcaaggaagcgacctgttgatgcagacacc
gcatatgattcggcaatgagtaatgtttttcaggtgttgatgaatgtgtcaagagaattc
ttgagcaaaactggacctcatgctgctactattgatgagaatgaatttgaatatgctgaa
tatatatgtgagagtatggtgtctctgggtacatttaacctaaaatgtattagtggtgac
agcacaataatccctttctaccttcagcagatgctaggatattttcaacattttaagcta
gatctgcactaccagactctattcttttggctggctttgttgcgagatttacttctaaag
ccaaaggttattcaacatgcagctgttgacagttcattgaacaatctgagctctggttct
aaacaagctgacgatgggaagatgaatattttaagttttctgaatgaagatatatttagt
attatgctggaaatcacatttcaacgcatggtcaaaaaagaaagagtacaatctggcaca
gcatatggtattggggcactggaattgtggagtgatgatattgagggtaaaggagatttc
agtcagtaccgttcaagactgacagagttgattcggctaattacctgtagcaagcctctc
ctagctgctactaaggtttccgagaaaattttaataatcatcaatgccttttcacttgat
ccaactgctcagaattttgccgcaatggaaagcatgcaatttgctctagacaacattgtg
agtgcaatttatggcggctcaactgattataacaataatgattctgagatacgagtttca
ttaggcagaattcttgaaggtctacttcaacaactgctttcattgaaatggactgaacca
acgtttgtggaactacttgggcactatttagatgcaatggggcctttcttaaagtaccat
gctgatgctgtgggaagcgtgataaataagctgttcgagcttttaaattcacttccattt
gttgtaaaggatcctgctacaagtacggctcgccacgcaagattgcagatatgtacatca
tttattcgaattgccaaaacagctggaaaaagccttcttcctcatatgaaggcaatagct
gacacaatgtcttacttgcaaaaagaaggtggtcttcttcgtggggagcataatctgcta
ggggaagcatttcttatcatggcttctgctgctggggttcaacagcagcaagaagtttta
gtatggttacttgaacctttgagtaaacagtggatacaaactgaatggcaaaatgagttt
ttatcagacccgaatggtttgattcgcttgtgttctgagacaaagttcatgtggtcactt
ttccacactgtaacattttttgagaaggctcttaagagaagcggtgtcagaaaaggcagt
tcaagtgtactgaacacttcatcagaaaattatgttccctgtcatcctatggcatctcat
ctgtcatggatgctgcctcctcttttgaaactgcttcgaggtatacattctctatggtcg
ccgcctgttactcaagctttacctggagaaatgaaagctgcaatggttatgagtgatgta
gagcggacaagtcttctcggtgaaggaaatttaaaatcgtccaggactgcattgaatttt
attgatggaactcaattcgacatgaataaagaaggctctacagagtcaaatgaaaatgat
atacggaattggttgaagggtataagagatagcgggtataacgtactgggcttatcagca
accattggggattcatttttcaaaactatggatgcccattccgtagctttggctttattg
gagaatgtacagtcaatggaattcagacatatgaggcagcttgttcattcaatttatata
ccattaatcaaatgctgcccatcagatatgtgggagttgtggttagaaaagcttttgcat
ccaatattcctgtactcgcagcaggcccttagttgttcatggtccagtcttaaacaggaa
ggtagagcaaaggttccagatcgtcttggcatacctgcagactccgacttgaaagtggaa
gtaatggaggaaaagctactgcgaggcttgactcgtgagatctgtacgctcctctcgatt
ttgggttcccaaggattgaatactggtcttcctttagtagagcagtctgggcatgttaat
cgggtggatgtgtctgcacttaaagaattggatgcattttcttctagttccatgattggt
ttccttttgaagcacaaaggcctagctctactggcactgcagatagttttagacaccttt
aagtggggagatggtgaatctgtgactaaagtttcttccttctgtggatctattgttctc
ttggctgtttcatctagcaatgctgaactccgagaatttgttgcaaaggatttgttttat
gcaataattagtagtttggaatttgattcaaatgttaatgtcagcgctgagcttgttggt
ctatgccgtgaaatctttgtttatctatctgatagagacccagcacccaggcaggtgtta
ctctcccttccttgcattgcaccccaagatcttcttgcttttgaagaagctttagcaaag
acgagcagtcccaaggaacagaagcaacatatgaggagcttattgttgctagctacagga
aacaagctaaaagctcttgcgaatcctaaaagtgttggtgtgattaccaatgtttctgct
aggcctcgcagtttggtccctgctccagagcccagaaatgaggaaggccctataggtcta
gcagcaatcatgtaa
DBGET
integrated database retrieval system
