Daucus carota (carrot): 108227557
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Entry
108227557 CDS
T05350
Name
(RefSeq) probable lipid-A-disaccharide synthase, mitochondrial
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00540
Lipopolysaccharide biosynthesis
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
108227557
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dcr01005
]
108227557
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
108227557
Lipopolysaccharide biosynthesis proteins [BR:
dcr01005
]
Lipid A
108227557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-GeneID:
108227557
NCBI-ProteinID:
XP_017258260
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All DBs
Position
6:29665036..29673621
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AA seq
476 aa
AA seq
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MPGNLLRRLAVATTQGDLNMYRTVGVCNRVYSVGLFGQLNRCFSYSAVDMASKDGELRVF
IVAGEVSGDAIGARLMASLKNLSPFPTRFAGVGGVMMSKQGLKSIFPMEDIAIMGIWELL
PHLHKFRVCLKHTVKAAELFQPHVVVTIDSKGFSFRLLKQLRVRYAQQGLVGPPQFHYVA
PSFWAWKGGEKRLRGLAEFVDHVLCILPFEEEVCKVNGLPATFVGHPTLEDVLELKLERN
DATEWEVLGNAKKFRSEYGISSGSTVVTLLPGSRLQEVTRMLSVFSSTMEILKSSFTKLT
AVIHVAPNRNVEDYIRKVVDEWSIPVVLIPGEISRVKYDAFAASRVALCTSGTVALELQL
ARLPCVVAYRAHLLTELFIRYKAKITHISLPNILLDSSVIPEALFTACTPSKLATLLMDL
INNQACREEQIAAAKKVIELLHPVKRLEYINSGSPLFSYTPSSIAAHTVLHTQRIV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaatcttctgcgccggctcgccgtcgcgactactcagggagatttgaacatg
tatagaacagtgggggtttgtaacagagtatatagtgttggtttatttggacagctgaat
agatgtttttcatattctgcggttgatatggcttctaaagatggggaacttagggtcttt
atagttgctggagaggtttctggagacgctatcggtgctcgcttgatggcttctttgaaa
aacctctcccctttcccgacacgctttgctggtgttggaggggttatgatgtccaaacaa
gggctaaaatctatatttccaatggaggatatagcaataatggggatctgggagctattg
ccacatctacacaagtttagagtttgtttgaaacatacagtcaaggcagcagagttgttt
caacctcatgttgtagtgacaatagattcgaaggggttctcatttcgtcttctaaagcaa
ttacgggttagatatgctcagcaaggattggttggccctccacagttccactatgtagca
ccatcattctgggcctggaaaggtggtgaaaagagacttagagggcttgctgagtttgtt
gatcatgttttgtgcattctcccatttgaggaggaagtttgcaaagtaaatggattacct
gcaacttttgtgggccacccaacactggaagatgttttagagttgaagttggaaaggaat
gatgcaactgagtgggaggttctaggaaatgccaaaaaatttagaagtgaatatggaata
tcctcaggatccactgttgttaccctgcttcctgggagcagattacaagaagttacccgg
atgctttctgtcttctcgagcactatggaaattctgaagagctcatttacaaagttgacc
gcagtaattcatgtagcacctaacaggaatgtggaagactatatccgcaaagttgttgat
gagtggtctattccagttgtattaattccaggggaaatatcacgcgtcaagtatgacgca
tttgctgctagcagagtagcattatgtacgtcagggacagtggctttggagttgcagctt
gcacggttaccatgcgtagttgcatatcgagcgcatctattaactgagctgttcatacgt
tataaagctaaaataacacacatctccctgccaaatattcttctggactcgtctgtaatt
cctgaagctctcttcacagcgtgcactccctcaaagctggcaacattgctcatggacctc
ataaacaatcaagcctgccgagaagagcagattgctgctgctaaaaaggttattgagtta
ttgcatccagtgaaacgccttgaatatattaactcaggatctccgctgttttcttacaca
ccaagttctatcgctgcccatactgttttacacactcagagaattgtatga
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