Daucus carota (carrot): 108227592
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Entry
108227592 CDS
T05350
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108227592
03036 Chromosome and associated proteins [BR:
dcr03036
]
108227592
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108227592
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108227592
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108227592
microRNA pathway
RISC loading complex
108227592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108227592
NCBI-ProteinID:
XP_017258317
UniProt:
A0AAF1B4H2
LinkDB
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Position
6:complement(33695645..33702729)
Genome browser
AA seq
915 aa
AA seq
DB search
MENPDSELLPPPPAEIPPDVIPEQVQPEKEPEKNPDLNNNSSKPKRVLMQRPGIGSRGRK
TTFITNHFKVGFGNTSGHFYHYCISLFYEDDRPVEGKGIGRKVLDKVYETYESELGGRDF
AYDGEKSLFTVGSLPRNKMVFTVVLDAVVSKRTVENGGSGSPNGGDIKRMRRSSQSKTIK
VDISFAAKIPVQAIGNALRGQETENSQEALRVLDIILRQIAAKQGCLLVRQSFFHDSPRN
FTDLGGGVLGCRGFHSSFRATQGGLSLNMDGSTTTIVQPGPLVDFIIANQNCRDPFQVDW
AKAKRTIKNLRIKITTTNQEYKITGLSENKCQDQMFSMRSRSSKDENGEAENIELSVYDY
FVKTQGRKLQYSAELPCINVGKPKRPTYFPIEFCTLVSLQRYTKALTVIQRSSLVEKSRQ
KPQEKINILTETMKNNNYAADPMLRSCGVTIQSQFTKIDGRILVAPKLKAGGNDELFTRN
GRWNFNNKKYAEPAKIGDWAVVNFSARCDVRNICLDLARIGETKGISFSPPKAVVEELAQ
FRRAPPPIRVDKMFDQLMAEFPTEPPRFILCLLPDRKNCDLYGPWKKKNLSEFGIFNQCM
CPFRVNDQYLNNLLLKINAKLGGLNSLLAGEVARNLPVVSNKPTMIFGMDVSHGSPGHAD
VPSIAAVVSSRHWPLISRYRASVRSQSPKVEMIDGLFKPGSGNNDSGIVRELLLDFYTSS
GKQKPSQIIIFRDGVSESQFNQVLNKELDQIIEACKFLDENWSPQFTLIVAQKNHHTKFF
LEGSQDNVPPGTVIDTQVCHPSNNDFYMCAHAGMIGTTRPTHYHVLYDEIGFSADDLQEL
VHALSYVYQRSNNAISIVAPVRYAHLAASLVSLFKKFDEMSETSSSHGGVTGVGAPPVPE
LPKLHKNVCCSMFFV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcccgattcagagcttctgcccccaccaccagctgaaataccaccagatgtt
attcctgaacaagttcaaccagaaaaggaaccagaaaagaaccctgatcttaataacaac
tcatcaaaaccaaagcgagtcctaatgcaaaggcccggtattgggtctagaggacgaaag
acgacatttattaccaatcatttcaaagtcggctttggtaatactagtggccacttttat
cactactgtatttctctcttctatgaggatgatcgccctgtcgagggaaaaggtataggt
aggaaagtgctggacaaagtctatgagacttatgaatctgagttgggaggcagggatttt
gcttacgacggggagaagagcttgttcacagttggttctctcccgcgcaacaaaatggtg
tttacagttgtccttgatgctgttgtgtcaaagaggactgtggagaatggtggaagtggc
agtccaaatgggggtgacatcaagaggatgaggcgttcctcccagtctaaaacaattaaa
gtagacattagttttgcagccaagattccggttcaggctattggaaatgctttgagaggt
caagagacagagaactctcaagaggctctgagagtcttggacattatcttgaggcagatt
gcggcaaaacaaggatgtctacttgtccgccagtcatttttccatgatagcccaaggaat
ttcacagatctaggaggaggcgtccttggttgcagagggtttcattccagttttcgagct
acccaaggcggactatccttaaacatggatgggtctacaacgacaatagtacagccaggg
ccactggttgattttataattgccaatcaaaattgtagagatccgtttcaggttgactgg
gcaaaggccaaaagaacgattaaaaatctgagaatcaagatcacgacgaccaaccaggag
tacaaaattactggattgagtgagaacaaatgccaagaccagatgttctccatgaggtcc
cgcagttccaaagatgaaaatggcgaagctgaaaatattgaattgtcagtgtatgactat
tttgtaaaaactcaagggaggaagttacaatactcggcagagctaccctgcattaatgtt
ggcaaaccaaaacggcctacttatttcccgattgagttttgcactcttgtttcgctgcaa
cgctacacaaaggcattaactgttattcagagatcatcactggtagaaaagtcaagacag
aagcctcaggaaaagataaatatcctgactgagacaatgaaaaacaacaattatgctgct
gacccaatgctacgttcatgtggtgttactatccagagtcagtttactaagatagatggt
cgaattcttgttgctccaaagttgaaggcaggtggtaatgacgaactttttactcgaaat
ggtcgatggaactttaacaataagaaatatgcagagcctgctaaaattggggactgggct
gttgtcaatttttctgcccggtgtgatgttcgcaacatctgtctagatctggcgagaatc
ggagaaacaaagggaatttcattctcaccaccaaaagctgttgttgaggagttggcacag
tttagacgagcaccgccaccaattcgggttgataaaatgtttgatcagttgatggcagaa
ttccccacggaacctccacgctttattctgtgtcttcttcctgataggaagaattgtgac
ttatatggtccatggaagaagaagaatctctcagagtttggaatctttaatcagtgtatg
tgtcccttcagggtcaatgaccagtatctgaacaaccttttgctgaagattaatgccaag
cttggtggcttgaactctttgcttgctggtgaagttgcacgaaatcttcctgttgtatca
aacaagcctaccatgatatttggcatggatgtctcgcatggatctcctggtcatgctgat
gtgccttcaattgctgcagttgtcagttcaaggcactggcctcttatttcgcgctacagg
gcatctgttcgatcccagtcccctaaagttgagatgatagatggtctttttaaacctggg
tctggcaataatgatagtggtattgtaagggagctgttgttggacttctatacaagctcg
gggaaacaaaagcccagtcaaattataatattcagggatggtgtcagcgaatcacaattc
aaccaggttctaaacaaggagctggatcagataattgaggcttgcaagttcctagatgaa
aattggtcaccacagttcactttgattgttgctcaaaagaaccaccacacgaagttcttc
ctagaaggatctcaagacaatgttcctcctggaactgttattgatacacaagtctgtcac
ccatctaacaatgacttctacatgtgtgcacatgctgggatgatagggacaacaaggcca
actcattaccatgttttatacgatgagattggtttttcagctgatgaccttcaggaactt
gttcatgccttgtcctatgtctaccagagaagcaacaatgcgatatccatagttgcacct
gtccgctacgcacacttggcggccagcctagtctcgctattcaagaagtttgatgaaatg
tcagagacgtcttcgtcccacggaggtgttactggtgttggagcgccacctgtgcctgaa
cttccaaagctgcacaaaaatgtttgctgctctatgttcttcgtttag
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