Daucus carota (carrot): 108227597
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Entry
108227597 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase UPL7
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108227597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108227597
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108227597
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
HECT type E3
108227597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
JMY
Motif
Other DBs
NCBI-GeneID:
108227597
NCBI-ProteinID:
XP_017258322
UniProt:
A0AAF0XFF7
LinkDB
All DBs
Position
6:complement(32207164..32222000)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAEPRKHQVSLRGASAKEISRDALLERVSQERELRNYTRKATSAALFIQRVWRSYYSTKM
IALQLQRDWQDMISCCKMSTITATWISSSLLRPFLFFTTCLSTRYRKIQARDVNCMQMCF
KILLESLNSTDHQKNFCLLSTCSLEERRIWLYQAKKLISLCLLILAECDYTRQGANEFVI
LTSLGMRFLVMLTDAKAWKYNSESSFQDANNAVKELILFMGSNKSDLFVCVRRYIIRLDA
PFPQLTGAGQKDDKLLITASAITVSLRPFHILDIEKNDSLDVQHAAEQFFIFLLSIPWFT
QRLPAFLLSSLRHKSVLLRCFRALLISKERILEEISKVDHLMIPSSPRMMPQVGWALGNI
LCLATCSDHILDGHGYFTQDLDYTLYIQVVIILAEDLLYCLEKVGEFRKVNQDLYENAEG
SDESVETMLIDLCTTNMSLKMSFMDYFKPACQQWHLMKLLTFEKDCSIPISHNTPKDILE
SQGKRELLDVAYYYFCMLRIFSQLHPVGSLPVLNMLSFTPGFLLKLWEALERSIFPSESP
QAGNIVTKPSGSNSGKILERKQKQGAKDGGNKWLHVLHKITGKSNSDFDNMNLNNDLPTA
DQSDEDSIDFWEVETLKCGPEGLSNSSRCLFHLFCATYSHLLLVLDDIEFYEKQVPFTLE
KQRKIASMLNTLVYNALTHSISQQSVTFMDAAVRCLHLLYERDCRHQFCPPSLWLSPARK
NRPPIAVAARTHEILSTNLKADDSLAVPSTHSVITTTPHVFPFKERVQMFREFISMDKVS
RRMAGQVIGPGSQAVEIVIRRGHIVEDGFQQLNSLGSRLKSSINVSFVSECGLPEAGLDY
GGLSKEFLTDLAKAAFSPDYGLFSQTSASDRLLIPNTAARFLENGVQMIEFLGRIVGKAL
YEGILLDYSFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELFLDFTVTE
EAFGKRQIIELKPGGKDMCVTNENKLQYIHAMADYKLNRQVRYLSNAFYRGLTDLISPSW
LKLFNASEFNQLLSGGNYDIDVDDLQKNTRYTGGYTEGSRTVKLFWQVLAGFEPNERCLL
LKFVTSCSRAPLLGFKHLQPTFTIHKVAGDMPLWAAIGGQDLERLPSASTCYNTLKLPSY
KRSSTLRAKLLYAIKSNAGFELS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccaagaaagcaccaggtatcattacgtggtgctagtgctaaagagatcagt
agagatgctctacttgagagagtttctcaagaaagggagcttcgcaattatactcgaaaa
gctacatctgctgctctatttatacagagagtttggaggagctattattcgacgaagatg
attgcgttgcagcttcaacgggattggcaggatatgattagttgttgcaagatgtctacg
atcacagccacgtggatttcttctagtttgttgagaccatttcttttcttcactacgtgt
ttatcgactagatatcgtaaaattcaggctagagatgttaattgtatgcagatgtgtttt
aaaatattgttggaaagcttgaactcaactgatcatcagaaaaacttctgtcttctaagc
acttgttcgctggaagaaaggaggatatggctttatcaagcaaagaagctgatttccttg
tgcttacttatactagcggagtgtgactatactcggcaaggggctaatgagtttgtaatt
cttacatctctaggaatgcgttttcttgttatgttgaccgatgcgaaagcgtggaaatat
aattctgagagtagttttcaggatgccaacaatgcagtgaaggaattaattctgtttatg
ggcagtaacaaaagtgatttgtttgtttgtgtcagaagatatatcattagattggacgct
ccttttccacaattgactggtgcaggtcagaaagacgataaactactgattacagccagt
gcaattactgtatctctacggccctttcatatattggatatagagaagaatgactcctta
gacgtgcagcatgctgctgaacaattcttcatttttttactgtctatcccatggtttaca
caacgcctaccagcatttctcttatcttcgttaagacataagtctgtgttattgcgttgc
ttcagagcattactgatttcgaaagagagaatattagaggagatctccaaggtggatcac
ttgatgataccatcatcacctagaatgatgccacaagttggttgggctcttggaaacata
ttatgtcttgcaacatgcagtgaccacattctcgatggtcatggatattttacccaagat
ctagactatactctgtacatccaagttgttatcatacttgctgaggacttgttatattgt
cttgagaaagttggagagtttagaaaggttaatcaggatctgtatgaaaatgctgaaggt
tctgatgaatctgttgagacgatgctgattgatctgtgcaccactaacatgtctttgaag
atgtctttcatggactattttaagcctgcttgtcagcaatggcatcttatgaaactgtta
acctttgaaaaggattgttccattcccattagtcataacacacccaaggacattctagag
tcccaaggaaaaagggagctgcttgatgttgcatattactatttttgcatgctgaggata
ttttctcaactacatcctgtgggatcattgcctgttctcaacatgttatcttttactcct
gggtttctccttaaactgtgggaagcgctcgaaagatctatttttcccagtgagagtcct
caagcaggaaacattgtaactaaaccatctggaagcaacagtggtaagatattagaaaga
aagcaaaagcaaggagctaaagatggaggcaataaatggttacatgtcttgcataaaatc
actggcaagtcaaattcagattttgataacatgaatttgaacaatgacctgcctactgct
gatcagagtgatgaggattctatagatttttgggaagtagagactttaaaatgtggtcca
gaagggttatcaaatagttcccgttgtctttttcatctattctgtgctacttattcacac
ttgttgttagttcttgatgacattgagttctatgaaaagcaggttccctttactctggag
aagcaacggaaaattgcatcaatgcttaataccctggtatataatgccttgacccacagt
ataagccaacagagtgtaacttttatggatgctgccgttcgatgcctacacctattgtat
gaaagggactgcaggcaccagttttgccctccttctttgtggctatcaccagctagaaag
aataggcccccaattgctgtggctgccagaacacatgaaattttatctaccaatctcaaa
gctgatgactctttggctgttccaagcacacattctgtcattacgaccactccacatgta
ttcccatttaaagagagagttcagatgttcagagaattcattagcatggacaaagtatct
cgaagaatggccggtcaagtgataggacctggttcacaagctgttgagattgtaattcgt
cgtggtcatattgttgaagacggatttcaacaactgaactcacttggatcaaggttgaag
tctagtattaatgtgtcatttgttagtgaatgtggtcttccggaggctggcctggactat
ggtggtttatctaaagagtttctgactgatttagcaaaggctgctttttcgccagactat
gggctattctcccagacctcggcttcagatagacttttgatccctaatacagctgctagg
tttctagagaatggtgtgcagatgattgaatttcttggaagaattgttggcaaagcactg
tacgaagggatattactggattattccttttctcatgtttttgttcaaaagctcctaggc
cgctatagctttcttgatgaattatcgacacttgacccggagctctacaggaatctaatg
tatgtgaagcattatgatggtgatgtcaaagaactctttctggattttacggtcactgaa
gaggcatttgggaaaagacaaataattgagctaaaacctggtggaaaggatatgtgtgtg
acaaatgagaacaaattgcagtacatccatgcaatggcagattataaactcaatcggcag
gtacggtatttatcgaatgcattttacagaggattaacagatcttatatctccatcttgg
ttgaagttgtttaatgcaagtgaatttaatcagttgctttctggcggaaattatgacata
gatgttgatgatttacaaaagaatacccgctacactggtggctataccgaagggagtcgg
acagtaaagctgttttggcaggtgttagcggggtttgagcctaatgaacgatgtttgcta
ctcaaatttgtgacaagttgttctcgagctcctttacttgggtttaaacacttgcagcca
acatttacaattcacaaggttgcaggtgatatgcctctatgggcagcgattggtggacaa
gatttggagcgccttccatcagcatcaacatgctacaacactctcaagcttccgagctac
aaacgttcaagcactttgagagcaaagctactgtatgctatcaaatcaaatgcaggattt
gaactctcttaa
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