KEGG   Daucus carota (carrot): 108227599
Entry
108227599         CDS       T05350                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108227599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dcr03041]
    108227599
Spliceosome [BR:dcr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108227599
 Complex B
    108227599
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Tox-GHH Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 108227599
NCBI-ProteinID: XP_017258326
UniProt: A0AAF0XE50
LinkDB
Position
6:32317452..32320711
AA seq 329 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDPQGQPLDPRKIQDHFEDFYEDLFEELSKYGELESLNICDNLADHMVGNVYAQFREEE
HASAAVQSLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRQLFGKNRRGRSRSRSRSPQHNRGYEERPHGGGRGYGRRGDYADHRQNDRGRRPRSRSP
GRRGGRSRSPSGRRNKSPVREGSAERRAKIEQWNRERDQAETGNKSANNYSNDDRNSDGN
GNGNAHNKEQYYEPHQQRQNVPDDGGYSN
NT seq 990 nt   +upstreamnt  +downstreamnt
atggcagaacatctagcctctatattcggcacggagaaggacagggtgaactgccctttc
tacttcaagatcggcgcctgtcgtcacggagatcgatgctccaggcttcacaccaagcct
agtatcagccctactctccttctctctaatatgtatcagcgtcctgatatgattactcct
ggtgttgatcctcagggccagcctctcgatcctcgcaaaatccaagaccacttcgaggat
ttttatgaggacttgtttgaggagttaagcaagtatggtgaacttgagagcttgaacatc
tgtgacaatctggctgaccacatggtggggaatgtatatgctcagtttagagaggaggag
catgcttcagctgctgtgcaaagcctcactggaagattttatgcagggcgtcccattatt
gttgacttctctcctgtgacggattttcgtgaagctacctgtaggcagtacgaggaaaat
gtatgtaatcgaggtggctactgcaattttatgcatctgaaaaagattagcagggaactg
aggagacagctgttcggaaagaacagaaggggacgaagtcgtagccgaagccgcagccct
cagcataaccgtggctatgaagaacgtcctcatggtggtggtcgtggttatggtcgaaga
ggtgattatgctgatcaccgccagaatgatcgaggcaggaggcccagaagtaggagccct
gggagaaggggtggaaggagcaggagtcccagcggcagaagaaacaagagtcctgttagg
gaaggcagtgctgagagaagggccaaaattgagcaatggaacagggaacgggatcaggca
gaaactggtaataagagtgctaataattacagtaatgacgaccgtaatagtgatggcaac
ggcaatgggaatgctcataacaaagagcaatactatgaacctcatcagcagcgacaaaac
gtaccagatgatggaggttatagcaactga

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