Daucus carota (carrot): 108227632
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Entry
108227632 CDS
T05350
Name
(RefSeq) PWWP domain-containing protein 1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00270
Cysteine and methionine metabolism
dcr01100
Metabolic pathways
dcr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108227632
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108227632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108227632
03032 DNA replication proteins [BR:
dcr03032
]
108227632
03036 Chromosome and associated proteins [BR:
dcr03036
]
108227632
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
108227632
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108227632
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
108227632
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108227632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
108227632
NCBI-ProteinID:
XP_017258368
UniProt:
A0AAF0XAP6
LinkDB
All DBs
Position
6:20298406..20303361
Genome browser
AA seq
1161 aa
AA seq
DB search
MLSVMNNKDDVDTDIKDLGEKIVAFDESSDGNDSLDVKCNDGDEAGVSELKKVSKDKILG
ENEGLIDWVGGDEKVKKGKEISGRNDESGRVEVSDSGVRKGEKGKERRMKRVEKVEKYEG
FEIGDLVWGKVKSHPWWPGQIYNEKLASPEVCRLKTAGYVLVAFFGDCSYGWFDPAELVR
FDFGYAEKSRQVSSRTFIRAVEEAVDEASRRRSLGLACRCRNLYNFHPTAVEGYVSVDVG
EYESGSVYSVDQIRRSRDEFKPTEVLGFVNQLALSPTEVKHEAIEFVKDKATALAYRKAV
YAEFDETYAQAFGLEPEHPSRAHMLALNQLPKAANPVPLSGPLVIAEVLGKGKGSSKSNK
SRERAKKDQYLFKRRDETNDSKTNVPVLPGEAASSEQPVFVDGSLAISANECPSQKKSAK
VSKKHKDSLKQQGAESSVRGAISDLRQEAGGKGDIRDDKPSGLEFGHSDSHMNSVNSSNN
KPVGEAPSHSCQAYEAKSSQNEGTVVGLRSQESSRSDSVVDGKHDKAPLMTIASVGSPEL
SSSQAAKTEVHGEQAHDGGVGHPLGTGNAKSNKDGLDINDGIQAKKVKVRKRPADKVNSE
NSVPLMKKKRKKETLNSENLKNNQSCGEVEASVGSIAKSPAQVATASREELHVELQGNGS
KITVETILAQKMSLAEKIELESPELLHSLKAFARSYKGGSNSCMEAVRQAFLRYRSLVFE
KSLVLLPADSGLAETHISEPPTGTKTVDIPAEDVKERQLIKPHRQVARPEDPSKGGLKRG
PSDRQEEIAAKKKKKINDAKELKTMKASQKTVVMQQGKEVSGQKMKSIKPAPLKEARGPT
MKSTKPKALSEASVPTMRSLKPAPLKKTEPSAKAPGPLMLVMKFPPQGTLPSMMELKARF
ARFGQLDHSATRIFWKSSTCRLVYRRRVDAEAACRFASTHNLFGNADVRYFTREVEVAAS
VAEQGKVHKDDSSVGNSQLTDSAVEQRPARSLPQRTLQQPGQPKSILKKSNGDETSGTNG
GGKGTRVRFILGEEETDRGGEQSMIGNKNINNNASFVDGGASSSTNHGLGFNSKNIVIPT
SSLPILPVPTAVDILRPPNFLNHTELAPRNGHNINSVNAPSTIPTPPNVDISQQMMGLLN
KCSDVVSKVTDYLGYVPMHPL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgctatcagttatgaataataaagatgatgtagatacagatatcaaagatttaggtgaa
aagattgttgcttttgatgaatctagtgatggtaatgatagtctagatgttaaatgtaac
gatggtgatgaagctggggtttctgaattgaagaaagtttcaaaagataagattttgggg
gaaaatgaggggttgattgattgggttggtggcgatgagaaagttaaaaaagggaaggag
attagtggtcggaatgacgagagtggtcgggtggaggtgagtgatagtggagtgcggaaa
ggggagaaggggaaggagagaaggatgaaaagggttgaaaaagtcgagaaatatgagggg
tttgagataggggatttagtttgggggaaggtgaaatcgcatccttggtggccgggacag
atctataacgagaaattagcgtcgccggaggtttgtaggttgaagacggcagggtatgtg
ttggtggcattttttggtgattgtagctatggttggtttgatcctgctgagcttgtgcgg
tttgactttggttatgctgagaaatcacggcaggtgagttctaggacttttattagagct
gttgaagaagctgttgatgaggcgagccggaggcggtctctgggcttggcttgtcgatgt
agaaatttgtataattttcatccaacagctgttgaggggtatgtttctgttgatgttggt
gagtatgagtcaggtagtgtatactctgttgatcagataagaagatcaagggatgaattt
aagcctaccgaggtgcttggttttgtgaatcaactggcgttgtcacctactgaagtcaag
catgaggccatagaatttgtgaaggataaggccactgctcttgcctacaggaaagcagtg
tatgcggaatttgatgagacctatgcacaggcatttggtttagagcctgagcacccttct
cgtgcacatatgctagccctgaaccagcttccaaaagcagcaaatccagttccattaagt
ggccctctggtaattgctgaagtccttggtaaggggaagggttcttcaaagtctaataaa
tccagggagcgtgcaaagaaggatcagtatctatttaagcggagagatgaaacaaatgac
tcaaagactaatgttcctgtccttcccggcgaagctgcttcctcagagcagccagttttt
gtagatggctctttggcaatatcagccaatgagtgcccttcgcaaaaaaaatcagcaaag
gtctctaaaaagcacaaggattcactaaaacagcaaggagcagaaagttcagtgagagga
gcaatctcagatctgagacaagaagcaggtgggaaaggagatataagggatgataagcct
tctggcttggagtttggccattctgactcccatatgaattcggttaattcttccaataat
aaaccagtgggtgaagctccatctcactcttgccaagcgtatgaagcaaaatcttcccag
aatgagggaacggttgtagggctgagaagtcaagagagctctagatctgattcagtggtt
gatggcaaacatgacaaagcacctttaatgaccattgcatctgttggaagtcctgagctg
tcttcgagtcaagcagctaaaactgaagtacatggagaacaagctcatgatggtggtgtt
ggacatcctttgggaacaggtaatgcaaagtctaataaagatggtctagatataaatgat
ggcattcaagcaaagaaagtcaaggtccgtaagcgacctgctgataaagtgaacagtgag
aattctgtgccattgatgaagaagaagagaaagaaagaaacattaaattccgaaaatttg
aaaaataatcagtcttgtggagaagttgaggcgtcagtggggagcatagctaaatcacct
gcgcaagttgctaccgcctcccgagaggagttgcacgtggagcttcaggggaatggaagt
aagatcacggtcgaaactattctggcacagaagatgagtctagcggagaagatagagttg
gagtctccagaattacttcattccttgaaagcttttgctcgcagttacaagggaggcagc
aacagctgtatggaagctgttcggcaagctttccttagatatcgttcacttgtttttgaa
aagagcttggtcctattgccagctgacagtgggttggccgaaactcatatcagtgagcct
ccaactggtaccaaaaccgttgatatccctgctgaagatgttaaagagagacaattaatc
aaaccccatagacaagtggctaggcctgaagatccatctaaaggcgggctgaaacgggga
ccatctgatcgccaagaagaaattgctgcaaagaagaagaaaaaaattaatgacgcgaaa
gaattaaaaacaatgaaggccagtcagaaaactgtagttatgcagcagggcaaagaagta
agcgggcagaaaatgaagtcaattaaaccagcacctctcaaagaagcacgcgggcccaca
atgaaatcaacgaagccgaaagctctctcagaagcaagtgtgccaacaatgagatcactt
aaaccagcacctctcaagaagacggagccttccgcaaaagcaccaggtccgttgatgttg
gtgatgaagtttccaccccaaggaacactgccatctatgatggaacttaaggctcggttt
gcccgttttgggcaattagatcattctgctacacgtatattctggaagagctcaacatgt
cgtctggtatatcgacgcagggttgatgcagaggcggcatgtagatttgcttctactcat
aacttgttcgggaatgctgatgtcaggtatttcacgcgggaggttgaagttgcggcatct
gtagctgaacagggtaaagtgcacaaggatgattcatcagtgggaaactcacagttgaca
gattcagcagttgagcaaagaccagccagatccctacctcagcggacactgcaacaacca
ggtcagccgaaatccatccttaagaagtcaaatggtgacgagaccagtggcacaaatggc
ggtggtaagggaactcgtgtaagattcattttgggtgaggaagaaacagatagaggggga
gaacaatcgatgattggtaataagaacattaacaacaatgctagttttgttgatggtggt
gcatcttcttcaactaatcatggattgggttttaatagtaagaatattgtcattcctaca
tcttccttgcctatacttcctgtacctactgctgttgatattttaagaccgccgaacttt
ttgaaccatactgaattagcaccaagaaatggtcataatattaacagtgtgaatgcacca
tccactatcccaactccccctaatgtggatatctcacagcagatgatgggccttttaaat
aagtgcagtgatgttgttagtaaagtgacagattatctaggatatgtgcctatgcatcct
ctataa
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integrated database retrieval system
