Daucus carota (carrot): 108227707
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Entry
108227707 CDS
T05350
Name
(RefSeq) plant UBX domain-containing protein 10
KO
K18726
FAS-associated factor 2
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108227707
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108227707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
FAF1
DUF6739
RMI1_N_C
Motif
Other DBs
NCBI-GeneID:
108227707
NCBI-ProteinID:
XP_017258498
UniProt:
A0A161ZTC2
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Position
6:25817865..25820163
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AA seq
387 aa
AA seq
DB search
MSSRRGSGRSMLEASNKAIYRRMVNLPRNILGGFSRVMNQGIDLVGNIGGRRNQNPPLNF
PPVQYQPQPLMIQEEWAFLSNYEQQFGTVHPFFYACRFIEALKIAQDEHKFLFMYLHSPD
HPFTPSFCKETLCSEVVVQFLDANFVSWGGLVDRGEGLHMANTLRPASFPFCAIVAPAPG
DNLAVLQQIEGPVSPAELVEILQRTMEEQGSAFGDAAKAREEEERRRVDRRIREEQDNAY
LASLQKDQAMENEMMNLKLKDKGKKQVEASSMEKHEQNHKPNPSKKKNSKAPKVTTTHKV
TSTNDRDAPLTQILIRFPNGERREKSFSCTEKIGAIYRYIDSLNMAGLGSYKLISSFPRK
VYGVDQMLTTLKDAGLHPRASLFLELP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaggagaggaagtggaagatcaatgttggaggcctctaacaaagcaatttat
cgcagaatggtaaacttaccgcgtaatattttaggaggattctcaagagtaatgaaccaa
ggaattgatcttgtggggaatattggaggaagaagaaaccaaaatccaccattgaacttt
cctcctgtgcaatatcagcctcagcctttaatgattcaagaagagtgggctttcttgtct
aactatgaacaacaatttgggacagtccatcccttcttctatgcctgtcggttcattgag
gctctgaaaatagctcaagatgagcacaagttcctttttatgtaccttcactcacctgat
caccccttcacaccatctttctgtaaggagaccttgtgttctgaagtagtagtgcagttc
ctggatgcaaattttgtttcttggggtggacttgttgatagaggagaaggtttgcatatg
gctaacacgcttcgccctgctagctttccattttgcgctattgttgctccagctcccggt
gataacttagctgtgctgcaacagatagaagggccagtttccccagctgaactagtggag
attctacaaagaacaatggaagagcaaggatctgcctttggtgatgcagcaaaggccaga
gaagaagaagaaaggagaagagtagatcgtcgcataagggaagaacaagacaatgcatat
cttgcatccctgcaaaaggatcaggctatggaaaatgaaatgatgaatctgaagttgaaa
gataaaggcaagaaacaagtagaagcttcaagtatggaaaaacatgaacaaaatcataaa
ccaaatcctagtaagaagaagaacagcaaagcaccaaaggtcaccactacgcacaaagtt
acttcaactaacgatagggatgctccgttaactcagatactaataagatttccaaacgga
gaaaggagggagaaaagcttttcctgcacagagaaaattggtgcaatttatagatacatt
gattcattaaacatggctggactcgggagttacaagctgatatcgagctttcctaggaaa
gtatacggtgtggatcagatgctaacaacactcaaagatgctggtcttcatcccagagca
agcctgttcttagagctgccttga
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