Daucus carota (carrot): 108227762
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Entry
108227762 CDS
T05350
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108227762
Spliceosome [BR:
dcr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108227762
Other components
Complex C specific factors
108227762
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
108227762
NCBI-ProteinID:
XP_063935419
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Position
6:complement(5647611..5654419)
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AA seq
860 aa
AA seq
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MDDDQEMEKFGMDNDFEGGQYVGAEFYYARRKDKRTQTKDDVLYGVFASDDSDSDDYSSK
KKKKRKNDLSRKADLTKPVSFVSTGVVMPNQEIDKNSEEEDKDQYDDTPSGLGLGASRFG
SSGLGFSSDGKGKPAEEVQVETEDDYLPTSFGEKIKKGALLRRQEKEKEKSKINLKSSQG
ARKESSNHGNIGGFEQHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPVEAKLRPQKMGMGY
NEYKEATLPTLKELEEKKSIPNAVQSSENRSKEKLWSKQARSKKKKMNYVTAEELLAKKE
EQGLEVVQKVFDMRGPQVRILTNLENLNAEEKARENDIPMPELQHNVRLIVDLAELDIQK
LDRDLRNERETVVSLQQEKERLNKEVVNQKQQLDNMEEIVSVLDTIGNENLSGTLTLTSL
ANSFGNLQKQYADDYKLCNLSCIACSFAMPLFIRVFQGWDPLQNPAHGLEVISLWKNLLQ
GDLTDPGSPYTQLIMEVVFPAVRISGTNTWQAREPEPMLRFLESWEELLPIPVRQTILDN
VVMPKLSAAIDSWDPRRETIPIHLWVHPWLPWLRQKLEIFYHTIRIRLESVLHAWQPDDI
SAFCILSPWKTVFDSASWEQLMVRYIIPKLLTVMHEFQVNPANQNLDKFYLVRTWATAIP
ISHMLHLMDVFFNKWQEVLYHWLCSRPNFEEVTSWYVGWKELIPPELLANEHIRYRLNVG
LEMMNRAFEGIEVVQPGMRENINYRRPPEQRPFGAPQTAAYNAQQASATPVSATQMGGIG
GGNEMSLKDVIEFYAQQNGLLFKPKPGRTQDGHQIYGFGNVSIIIDSLNQKVFAQTEEKW
SLVSLDQLPELHNRSISRRR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatcaggagatggagaagtttggaatggataatgattttgagggggggcag
tatgtaggtgctgaattttattatgctaggcgtaaggacaagagaacccagacgaaagat
gatgtgctctatggcgtctttgcgtctgacgatagtgattcagatgattactcttccaag
aagaagaagaagcggaaaaatgacctgtctagaaaagctgacctcactaagcctgttagt
tttgtgtccactggcgttgtcatgcctaatcaggaaattgataaaaattccgaggaggaa
gataaagatcagtatgatgataccccttctggtttagggctaggtgcgtctcgatttggt
tcatctggccttggttttagttccgacggaaaaggaaagccagctgaagaagtgcaagtt
gaaacggaagatgattatttgccgacatctttcggagagaagattaagaaaggtgcacta
ttgcgccggcaagagaaggaaaaggagaagtcaaaaattaatctcaagtcgtcccaaggg
gcaaggaaggaatcaagtaaccatggcaatattggtggattcgaacaacacaccaaaggg
ataggaatgaagttgcttgaaaagatgggttacaaaggaggcgggcttggaaaaaatgaa
caaggtattgtggcacctgttgaggcaaagttgcggcctcagaaaatgggaatgggttat
aatgaatacaaggaagctactctgcctacattgaaggaactggaagaaaaaaagtctatc
cccaatgcagtgcagtcctcagaaaatcgatcgaaagagaaactctggtctaagcaagca
cgatctaagaagaagaagatgaattatgttactgctgaagaattgctggcgaagaaagaa
gagcagggactggaagttgttcaaaaggtgtttgatatgaggggaccgcaggttcgaatc
ttgacaaacttggagaacttgaatgctgaagagaaggctagggaaaatgatatcccaatg
cctgaacttcagcataatgtcagattaattgtcgatttagctgagcttgatatacagaag
ttagatcgagatttgagaaatgagagggaaacagtggtcagtttgcagcaggagaaggaa
aggcttaacaaagaggtagtgaaccagaagcagcagcttgataatatggaggagatagtt
tctgtcttggacactataggcaatgaaaacttgtcaggaacattgacattgacctctctt
gcaaactcatttgggaacttgcaaaagcaatatgctgatgattacaaattgtgcaacttg
tcgtgcattgcctgttcgtttgctatgcctttgttcataagggtgtttcagggatgggac
ccactccagaatcccgcacatgggttggaagttatatccttgtggaaaaacctattgcaa
ggtgatctcactgatcctggttcaccttatacacagctaataatggaagttgttttccca
gctgttaggatatcgggcactaatacttggcaagcaagggaaccagagccgatgcttcga
tttttggagtcatgggaggagctgctgcctattcctgttaggcagaccatattagacaat
gtagtcatgcccaagttgtcagctgctattgattcgtgggatccccgcagggaaacaata
ccgattcatctttgggtgcatccatggttaccatggttacgtcagaagttggagattttc
taccacacaattcgcatccgtttggaaagtgtgcttcatgcttggcagcctgatgatatt
tctgcattctgtatattgtccccttggaagactgtatttgattcagccagctgggagcaa
ctaatggtccgatatattatcccaaagttgttgaccgtcatgcatgaatttcaagtaaat
ccagctaaccaaaatcttgataagttctacctggttaggacttgggctactgctattcca
atttcacacatgcttcatttaatggatgtgtttttcaataagtggcaagaagttctgtac
cactggttatgctcacgcccgaactttgaagaagttaccagctggtatgttggttggaag
gagcttattcctcctgaacttctggcaaatgaacatatccgataccgccttaatgtgggt
ctggagatgatgaacagagcttttgagggtatagaggtggtacaacctggtatgagggag
aacattaattatcgcaggccgccagagcaaagaccgtttggggctccgcaaacagcagcc
tataatgctcaacaagcttctgccaccccagttagtgcaacacagatggggggtataggc
ggtgggaatgagatgagtttgaaagatgttattgagttttatgcgcagcagaatggatta
ttgtttaagcctaaacctggcagaactcaagatggtcatcagatatatggctttggtaat
gttagcattataattgattctcttaaccagaaggtgtttgcacaaactgaagagaagtgg
tccttggtgtcacttgaccagcttcctgagctgcacaatcgttctatttcaaggcgacgt
taa
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