Daucus carota (carrot): 108227800
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Entry
108227800 CDS
T05350
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108227800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108227800
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108227800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
108227800
NCBI-ProteinID:
XP_017258635
UniProt:
A0AAF0XE98
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All DBs
Position
6:34993149..35004726
Genome browser
AA seq
861 aa
AA seq
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MANEADMSSWTDLLHSSSKLVEQAAPSAQFPPLQRNLDQLEALSKKLKSKTLRTEAPSQS
IAATRLLAREGLNAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAVQEA
QKDNVRSFNDYMMTVLEEDWQKEKRDFLQSLSRITSLPRTNVGGSSPASGHHNQMVSVSK
PHLSPMSSRMELAPPADKSVAEKKAAVYAQTVKTLNDARECGLPFKPATAFKSAYDSLNL
DTSGGKSVSMQKIWHLIQMMMGEDSYPQQNVSKKMSLIIGARRHLEWGHEKHVTETIQSH
PAQAALGGAVGKLQRIHAFLRIRLRDYGVLDFDAGDTRRQPPVDTTWQQIYFCLRTGYYD
EAKDVASSSRVSQQFASQLKEWISSGGMVSAETAASAAEECEKMLRMGDRVGRTAYDKKK
LLLYAIVSGSRRQIDRLLRELPTLFNTIEDFLWFKLCAVRDQPGGSSFVLNDGSSPYTLT
DLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAILYLYKDMGNEAYNIDAVHISIV
VGDHGILAEGFGAGQTLGMMDAFAEASSLIRQYGALYLQHDDLLMALEYYAQAAATMGGG
QLSWTGRGSADQQWQRTSMLKQLLMELLLRDGGIHLLLGSRGAGEEGELGRFLTDGKSRQ
QFLLEAARQCQEAGLYEKSIEIQKRVGAFSAALDTINKCLSEAIGALSRGRLDGESRTAG
LIHSGNELVETFKYYPEVSLQEREQVLEQQMVLRQLETILSIHKLSRLGNHIDALREVAR
LPFLPLDPRAPDVNVDVFQRLSPHVQACVPDLLKAALHCLDNAIDTDGSLRALRTKIANF
LANNLNRNWPQDLYERIARSL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagcagacatgagtagctggaccgatcttctccattcttcatcaaaactc
gtcgaacaagccgctccttccgctcaatttccgcctcttcagaggaatttggatcaatta
gaagcattgtcgaagaagcttaaatcgaaaacattgcgaaccgaagctccctcgcagtcc
attgctgctactaggcttcttgcacgagaggggttaaatgccgagcagcttgctcgagat
cttaagtcgttcgaactgaagactacatttgaagatgtttttcccgccgaagcaacaagt
gttgaagaatacctgcaacaggtccatgaaatggcaatggtatctgctgtccaggaagcc
cagaaagataacgttaggagctttaatgattatatgatgacagtattggaggaggactgg
caaaaggaaaaacgggacttccttcagagtttaagtcgcatcacatcattacctaggaca
aatgtgggtggttcaagtcccgccagtggtcatcacaatcaaatggtatccgtttctaag
ccccatctttcacctatgtcatctcggatggagctagcacctccagctgataagtccgtt
gctgagaaaaaagctgcagtgtatgctcaaactgtcaagaccttgaacgatgctagggag
tgcggcttaccatttaaacctgccacagctttcaagagtgcctatgatagtttaaatctg
gatacttctggtggtaaatcagtaagcatgcagaaaatatggcacctaattcagatgatg
atgggtgaggattcatatcctcaacaaaatgtttcaaagaaaatgtcactgataattggt
gcaaggcgtcaccttgaatgggggcatgagaaacatgtcactgaaacgatacaaagtcat
cctgctcaggctgctctgggtggagccgttggaaaattgcaacgaattcatgcctttcta
cggattaggttgagggactatggtgtgcttgattttgatgctggcgatactcgtaggcag
cctcctgttgatactacttggcagcagatatatttctgcttaagaactgggtactatgat
gaagctaaagatgttgcatcatcctctcgtgtatctcaacagtttgcttcccagcttaaa
gagtggatttcttctggaggcatggtatcagctgagactgctgcttctgctgcagaagaa
tgtgaaaaaatgttaagaatgggtgatcgagtagggcgaactgcatatgacaaaaagaag
ttgctcctatatgcaattgtctctggttctcggaggcagattgatcgattgcttagagaa
ctgcctactcttttcaatactattgaggatttcttgtggttcaaattgtgtgctgtacga
gaccaaccaggtggatcctcctttgtccttaatgatgggtcgtctccttacactttaact
gatttgcaagcttacttgaataagtttgagccatcatactatacaaagaatggaaaggac
ccgctggtgtatccctatgttttgctattgagtatacagttactacccgctattttgtac
ctgtacaaggatatgggaaatgaagcgtataatatagatgctgttcatatttcaattgtg
gtgggggaccatggaatacttgctgaaggttttggagctggtcagacactagggatgatg
gatgcttttgcagaggcatctagtttgattaggcagtacggggcactttatttacaacat
gacgatcttttaatggcactggaatattatgcacaagctgctgcgacaatgggtggaggg
cagctgtcatggactggaagaggaagtgcagatcagcaatggcagagaacatcaatgcta
aagcaacttctgatggagctgttgttacgtgatggtggaatacatcttttgctcggttca
aggggtgcaggggaagaaggtgagcttggaagatttttgacagatggaaaatcaagacaa
cagtttttgcttgaagctgctcgccagtgtcaggaagctggactgtatgaaaaatctatt
gagattcagaaaagggttggggcattctctgctgctttggatacgataaacaaatgtctt
tcagaagcaatcggtgctctatcacggggaagattggatggtgagagtcgtactgctggg
ctcatccactctggaaatgagcttgtggagacttttaaatattatcctgaagtcagtctt
caagaaagagaacaagttctggagcagcaaatggtgttaagacaacttgagaccattcta
tcaatccataagctgtccagactgggtaatcatatagatgctctgagggaggtggcaaga
cttccgtttctgcctcttgatccacgtgcaccagatgttaatgttgacgtgtttcagagg
ttatctcctcatgtccaagcttgtgtgcctgaccttcttaaagccgctcttcattgtttg
gacaatgcaattgatactgatggatcacttcgtgctttgcgaaccaagattgcaaatttc
cttgcaaacaatttgaatagaaattggcctcaagacttgtatgaaagaattgctagaagc
ctctga
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