KEGG   Daucus carota (carrot): 108227826
Entry
108227826         CDS       T05350                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108227826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dcr03041]
    108227826
Spliceosome [BR:dcr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108227826
 Complex B
    108227826
 Complex C
   U2 SnRNP specific factors
    108227826
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 108227826
NCBI-ProteinID: XP_017258676
UniProt: A0AAF0XGQ1
LinkDB
Position
6:complement(36605507..36614317)
AA seq 509 aa
MSATLLEATRANHEEVERLERTIVKDLQNDPTSNRDRLYQSHRVRSMIDQISSTTYKLIE
IYEDKDSARKDEIAALGGQTASGSSVFSVFYDRLKEIREYHRRHPSARVVDATDEYEQML
KEEPLIEFSGEEASGRYLDLHELYNDYINSKFGEPIEYSAYLQVFPQTQKIPRKLKLTRQ
YKEYLSKLLEYLISFFERTEPLQDLERIFSKVSTELEEQWATGMVQGWENDTHENGHDPS
QHTAIDLDYYSTVEELIEVGPERLKEALAALGLKTGGTIRQRAERLFLTKDTPLEKLDKK
HFVKGSHRSVQNGAASTPQETNDCKEIALMEAKMEKLCDLLHETIVRTKENVEKKQALTY
EEMEAEREEDEVQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NQSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWDRIQERQGVNKWR
PDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcggcgacgctactggaagcgactcgcgcgaatcacgaggaagtcgagcgcctcgag
cgcacaatcgtcaaggatctccaaaacgatcctacttccaacagggaccgtctttaccag
agccaccgcgttcgcagtatgattgatcaaatctccagcactacttacaaacttattgag
atatacgaggacaaggacagtgcgaggaaagacgagattgcggctctcggaggccagacg
gctagcggaagtagcgtgtttagcgtgttttacgatcgattgaaagagattcgggagtat
cataggcgtcatccttctgctcgtgttgttgatgcaacggacgagtatgagcagatgctt
aaggaggaacctctgattgagttcagcggcgaggaagcatccggtcgctaccttgatctg
catgaactgtacaatgattatatcaattctaaatttggagagccaatagaatactctgcc
taccttcaagtgtttccacaaacacaaaagatacctcgcaaattgaagttgacaaggcaa
tacaaggagtatctgagcaaattgctggagtatctcataagtttctttgaacggacagaa
cctttgcaagacctagaaagaatattctcaaaggtaagcactgagttggaggagcaatgg
gccactggtatggtgcaaggttgggagaatgacacccatgagaatggacatgatccatct
caacacactgccattgatcttgattactacagcacagttgaagagctcatcgaggtggga
cctgagcggttaaaggaggctttggcagcactaggactaaagactggtggtactattcgt
cagcgtgcagagaggctttttcttaccaaggacacacctcttgaaaaattggataaaaag
cattttgtgaagggttcacatagatcagtacaaaacggtgctgcttcaactccacaagaa
actaatgactgcaaagagattgccttgatggaagctaagatggaaaagctatgtgacctg
ttacatgagacaatagtacgcacaaaagaaaatgttgagaagaagcaggctctcacatat
gaagaaatggaagcagaaagagaagaggatgaggtacaagccgacactgaaagtgatgat
gacgagcagcagatctataatcctctgaagttgccaatgggttgggatgggaagcctata
ccttattggttgtataagcttcatggtcttggtcaggagttcaaatgtgaaatctgtgga
aaccagagttactggggccgtagagcctacgagcgccatttcaaggaatggaggcatcag
catgggatgcgttgtcttggtattccaaacaccaagaacttcaatgaaatcacatcaatt
gaggaagctaaagaattgtgggaccgtattcaagaacgtcaaggagtgaacaagtggcgt
ccagaccttgaagaagagtacgaagaccaagagggtaacatatataacaagaaaacatat
accgatctgcagcgccaggggttgatataa

DBGET integrated database retrieval system